Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05]
929,607 sequences; 2,689,351,490 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq135667 82.4 1e-13
seq125619 82.4 1e-13
seq65906 82.4 1e-13
seq319815 78.8 2e-12
seq241486 75.2 2e-11
seq20449 73.4 8e-11
seq19824 73.4 8e-11
>seq135667
Length=1735
Score = 82.4 bits (90), Expect = 1e-13
Identities = 208/309 (67%), Gaps = 8/309 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATT-CG 70
|||| |||||||||| | |||| ||| || ||||| || |||| ||| | |
Sbjct 489 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGGCT 432
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||
Sbjct 431 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 373
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 372 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 317
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||
Sbjct 316 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 257
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| |||||||| | |||||| | | ||||||| | | || ||||||||||| ||
Sbjct 256 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 197
Query 311 CAATCAAAC 319
|| || |||
Sbjct 196 CACTCGAAC 188
>seq125619
Length=15746
Score = 82.4 bits (90), Expect = 1e-13
Identities = 208/309 (67%), Gaps = 8/309 (3%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATT-CG 70
|||| |||||||||| | |||| ||| || ||||| || |||| ||| | |
Sbjct 6533 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGGCT 6590
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||
Sbjct 6591 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 6649
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 6650 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 6705
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||
Sbjct 6706 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 6765
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| |||||||| | |||||| | | ||||||| | | || ||||||||||| ||
Sbjct 6766 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 6825
Query 311 CAATCAAAC 319
|| || |||
Sbjct 6826 CACTCGAAC 6834
>seq65906
Length=57652
Score = 82.4 bits (90), Expect = 1e-13
Identities = 208/309 (67%), Gaps = 8/309 (3%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATT-CG 70
|||| |||||||||| | |||| ||| || ||||| || |||| ||| | |
Sbjct 19822 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAG--GAGCCAGGGCT 19879
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||
Sbjct 19880 CTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGG 19938
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 19939 GAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTA 19994
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||
Sbjct 19995 TGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGG 20054
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| |||||||| | |||||| | | ||||||| | | || ||||||||||| ||
Sbjct 20055 AGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 20114
Query 311 CAATCAAAC 319
|| || |||
Sbjct 20115 CACTCGAAC 20123
>seq319815
Length=8707
Score = 78.8 bits (86), Expect = 2e-12
Identities = 104/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 125 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 184
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 185 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 244
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 245 AACCAAGATCGGATATAGCTGGT 267
>seq241486
Length=8976
Score = 75.2 bits (82), Expect = 2e-11
Identities = 100/138 (72%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 1449 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAAAGCTCTAACAGGACTTGGA 1390
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || ||||| | |||||||| | || || ||||||||||||
Sbjct 1389 GGACCGAACCCACGTATGTGGAAAAATACGGGGATGACTTGTGGCTAAGGGTGAAAGGCC 1330
Query 312 AATCAAACTGGGAAATAG 329
|| ||| | ||| ||||
Sbjct 1329 AACCAAGATCGGATATAG 1312
Score = 75.2 bits (82), Expect = 2e-11
Identities = 100/138 (72%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 5450 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAAAGCTCTAACAGGACTTGGA 5391
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || ||||| | |||||||| | || || ||||||||||||
Sbjct 5390 GGACCGAACCCACGTATGTGGAAAAATACGGGGATGACTTGTGGCTAAGGGTGAAAGGCC 5331
Query 312 AATCAAACTGGGAAATAG 329
|| ||| | ||| ||||
Sbjct 5330 AACCAAGATCGGATATAG 5313
>seq20449
Length=328146
Score = 73.4 bits (80), Expect = 8e-11
Identities = 168/248 (68%), Gaps = 5/248 (2%)
Strand=Plus/Plus
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 91371 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 91429
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| ||||| || ||||||||| ||| | ||||| | || || |
Sbjct 91430 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 91485
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| ||| || |||| ||||| ||| | | ||||
Sbjct 91486 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 91545
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| |||||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 91546 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 91605
Query 312 AATCAAAC 319
| || |||
Sbjct 91606 ACTCGAAC 91613
>seq19824
Length=166985
Score = 73.4 bits (80), Expect = 8e-11
Identities = 168/248 (68%), Gaps = 5/248 (2%)
Strand=Plus/Plus
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 46491 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 46549
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| ||||| || ||||||||| ||| | ||||| | || || |
Sbjct 46550 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 46605
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| ||| || |||| ||||| ||| | | ||||
Sbjct 46606 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 46665
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| |||||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 46666 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 46725
Query 312 AATCAAAC 319
| || |||
Sbjct 46726 ACTCGAAC 46733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 963756783104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |