Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq36735 91.5 1e-16 seq351368 87.8 2e-15 seq189033 87.8 2e-15 seq125619 87.8 2e-15 seq99971 87.8 2e-15 seq97973 87.8 2e-15 seq65906 87.8 2e-15 seq37451 87.8 2e-15 seq30072 87.8 2e-15 seq19824 87.8 2e-15 seq5821 87.8 2e-15 seq4745 87.8 2e-15 seq26317 84.2 2e-14 seq343078 80.6 3e-13 seq120866 80.6 3e-13 seq13350 78.8 9e-13 seq115864 77.0 3e-12 seq122006 73.4 4e-11 seq60261 73.4 4e-11 seq53620 73.4 4e-11 seq37218 73.4 4e-11 seq29449 73.4 4e-11 >seq36735 Length=126798 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 27140 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 27199 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 27200 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 27234 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 27880 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGAT 27939 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || | || |||||||||||| ||||||| Sbjct 27940 GTATAGAGTCTAACACCTGCCCGGTGCTGGAAGGT 27974 >seq351368 Length=19022 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 12272 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 12213 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 12212 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 12167 >seq189033 Length=1425 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 370 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 429 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 430 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 475 >seq125619 Length=15746 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 7788 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 7847 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 7848 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 7893 >seq99971 Length=62529 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 14462 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 14403 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 14402 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 14357 >seq97973 Length=29817 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 26118 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 26177 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 26178 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 26223 >seq65906 Length=57652 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 21077 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 21136 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 21137 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 21182 >seq37451 Length=12408 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 1995 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 2054 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 2055 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2100 >seq30072 Length=18023 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 12369 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 12428 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 12429 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 12474 >seq19824 Length=166985 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 47687 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 47746 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 47747 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 47792 >seq5821 Length=57927 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 38149 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 38090 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 38089 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 38044 >seq4745 Length=393177 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 15542 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 15601 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 15602 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 15647 >seq26317 Length=41201 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| || Sbjct 22357 GGTCGCAGTGACCAGGCCCGGGCGACAGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 22416 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 22417 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 22462 >seq343078 Length=1551 Score = 80.6 bits (88), Expect = 3e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || |||||| || | | Sbjct 973 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 1032 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 | |||||||||||| ||||||| Sbjct 1033 CACCTGCCCGGTGCTGGAAGGT 1054 >seq120866 Length=14753 Score = 80.6 bits (88), Expect = 3e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || |||||| || | | Sbjct 12171 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 12112 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 | |||||||||||| ||||||| Sbjct 12111 CACCTGCCCGGTGCTGGAAGGT 12090 Score = 80.6 bits (88), Expect = 3e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || |||||| || | | Sbjct 14748 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 14689 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 | |||||||||||| ||||||| Sbjct 14688 CACCTGCCCGGTGCTGGAAGGT 14667 >seq13350 Length=12436 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||| ||| |||| |||||| |||||||||| ||| ||||| || Sbjct 1478 GGTCGTAGTGACCACGCCCGGGCGATTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 1419 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 1418 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 1373 >seq115864 Length=80542 Score = 77.0 bits (84), Expect = 3e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||| | || | || || |||||| || ||| Sbjct 15945 GCGACTGTTTATTAAAAACACAGGACTCTACTAAGTGGTAACACGATGTATAGAGTCTGA 16004 Query 128 CGCCTGCCCGGTGCCGGAAGGT 149 | | |||||||||| ||||||| Sbjct 16005 CACTTGCCCGGTGCTGGAAGGT 16026 >seq122006 Length=8996 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || | Sbjct 7176 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAAAATAAT 7117 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || | || ||| ||||||| ||||||| Sbjct 7116 GTATAGAGTCTTACACCTACCCGGTGTTGGAAGGT 7082 >seq60261 Length=23739 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | | ||||||||||||||||||||| ||||||| || | || || Sbjct 6598 ATACCAGGGGGTAGTGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 6539 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 | |||| | |||| ||| |||||||| ||||||| Sbjct 6538 GAATAGAGACTGACACCTACCCGGTGCTGGAAGGT 6504 >seq53620 Length=260137 Score = 73.4 bits (80), Expect = 4e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 70 GACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACG 129 ||||||||||||||||||||| ||||||| || | || || |||||| || |||| Sbjct 236269 GACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACA 236328 Query 130 CCTGCCCGGTGCCGGAAGGT 149 ||||| ||||| ||||||| Sbjct 236329 TCTGCCAGGTGCTGGAAGGT 236348 >seq37218 Length=144244 Score = 73.4 bits (80), Expect = 4e-11 Identities = 68/85 (80%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 110243 ATACCAGGG-GTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAATACGAT 110185 Query 115 GTATAGGGTGTGACGCCTGCCCGGT 139 |||||| || |||| |||||||||| Sbjct 110184 GTATAGAGTCTGACACCTGCCCGGT 110160 >seq29449 Length=82185 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||| ||||| ||| ||| || | || || Sbjct 81480 ATACCAGGGGGTAGCGACTGTTTATTAAAACCACAGGACTTTGCTAAGTGGTAACACGAT 81539 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| | ||||||||| ||||||| Sbjct 81540 GTATAGAGTCTGACACATGCCCGGTGTTGGAAGGT 81574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472506145267