Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05]
929,607 sequences; 2,689,351,490 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq36735 91.5 1e-16
seq351368 87.8 2e-15
seq189033 87.8 2e-15
seq125619 87.8 2e-15
seq99971 87.8 2e-15
seq97973 87.8 2e-15
seq65906 87.8 2e-15
seq37451 87.8 2e-15
seq30072 87.8 2e-15
seq19824 87.8 2e-15
seq5821 87.8 2e-15
seq4745 87.8 2e-15
seq26317 84.2 2e-14
seq343078 80.6 3e-13
seq120866 80.6 3e-13
seq13350 78.8 9e-13
seq115864 77.0 3e-12
seq122006 73.4 4e-11
seq60261 73.4 4e-11
seq53620 73.4 4e-11
seq37218 73.4 4e-11
seq29449 73.4 4e-11
>seq36735
Length=126798
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 27140 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 27199
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 27200 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 27234
Score = 86.0 bits (94), Expect = 6e-15
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 27880 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGAT 27939
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || | || |||||||||||| |||||||
Sbjct 27940 GTATAGAGTCTAACACCTGCCCGGTGCTGGAAGGT 27974
>seq351368
Length=19022
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 12272 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 12213
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 12212 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 12167
>seq189033
Length=1425
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 370 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 429
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 430 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 475
>seq125619
Length=15746
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 7788 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 7847
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 7848 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 7893
>seq99971
Length=62529
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 14462 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 14403
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 14402 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 14357
>seq97973
Length=29817
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 26118 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 26177
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 26178 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 26223
>seq65906
Length=57652
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 21077 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 21136
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 21137 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 21182
>seq37451
Length=12408
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 1995 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 2054
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 2055 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2100
>seq30072
Length=18023
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 12369 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 12428
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 12429 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 12474
>seq19824
Length=166985
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 47687 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 47746
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 47747 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 47792
>seq5821
Length=57927
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 38149 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 38090
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 38089 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 38044
>seq4745
Length=393177
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 15542 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 15601
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 15602 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 15647
>seq26317
Length=41201
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| ||
Sbjct 22357 GGTCGCAGTGACCAGGCCCGGGCGACAGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 22416
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 22417 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 22462
>seq343078
Length=1551
Score = 80.6 bits (88), Expect = 3e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||||| || | || || |||||| || | |
Sbjct 973 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 1032
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| |||||||||||| |||||||
Sbjct 1033 CACCTGCCCGGTGCTGGAAGGT 1054
>seq120866
Length=14753
Score = 80.6 bits (88), Expect = 3e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||||| || | || || |||||| || | |
Sbjct 12171 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 12112
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| |||||||||||| |||||||
Sbjct 12111 CACCTGCCCGGTGCTGGAAGGT 12090
Score = 80.6 bits (88), Expect = 3e-13
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||||| || | || || |||||| || | |
Sbjct 14748 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTCA 14689
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| |||||||||||| |||||||
Sbjct 14688 CACCTGCCCGGTGCTGGAAGGT 14667
>seq13350
Length=12436
Score = 78.8 bits (86), Expect = 9e-13
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||| ||| |||| |||||| |||||||||| ||| ||||| ||
Sbjct 1478 GGTCGTAGTGACCACGCCCGGGCGATTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 1419
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 1418 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 1373
>seq115864
Length=80542
Score = 77.0 bits (84), Expect = 3e-12
Identities = 66/82 (80%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||||||||||||||| ||||| | || | || || |||||| || |||
Sbjct 15945 GCGACTGTTTATTAAAAACACAGGACTCTACTAAGTGGTAACACGATGTATAGAGTCTGA 16004
Query 128 CGCCTGCCCGGTGCCGGAAGGT 149
| | |||||||||| |||||||
Sbjct 16005 CACTTGCCCGGTGCTGGAAGGT 16026
>seq122006
Length=8996
Score = 73.4 bits (80), Expect = 4e-11
Identities = 73/95 (77%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || |
Sbjct 7176 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAAAATAAT 7117
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || | || ||| ||||||| |||||||
Sbjct 7116 GTATAGAGTCTTACACCTACCCGGTGTTGGAAGGT 7082
>seq60261
Length=23739
Score = 73.4 bits (80), Expect = 4e-11
Identities = 73/95 (77%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | | ||||||||||||||||||||| ||||||| || | || ||
Sbjct 6598 ATACCAGGGGGTAGTGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 6539
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
| |||| | |||| ||| |||||||| |||||||
Sbjct 6538 GAATAGAGACTGACACCTACCCGGTGCTGGAAGGT 6504
>seq53620
Length=260137
Score = 73.4 bits (80), Expect = 4e-11
Identities = 64/80 (80%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 70 GACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACG 129
||||||||||||||||||||| ||||||| || | || || |||||| || ||||
Sbjct 236269 GACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACA 236328
Query 130 CCTGCCCGGTGCCGGAAGGT 149
||||| ||||| |||||||
Sbjct 236329 TCTGCCAGGTGCTGGAAGGT 236348
>seq37218
Length=144244
Score = 73.4 bits (80), Expect = 4e-11
Identities = 68/85 (80%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 110243 ATACCAGGG-GTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAATACGAT 110185
Query 115 GTATAGGGTGTGACGCCTGCCCGGT 139
|||||| || |||| ||||||||||
Sbjct 110184 GTATAGAGTCTGACACCTGCCCGGT 110160
>seq29449
Length=82185
Score = 73.4 bits (80), Expect = 4e-11
Identities = 73/95 (77%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||| ||||| ||| ||| || | || ||
Sbjct 81480 ATACCAGGGGGTAGCGACTGTTTATTAAAACCACAGGACTTTGCTAAGTGGTAACACGAT 81539
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| | ||||||||| |||||||
Sbjct 81540 GTATAGAGTCTGACACATGCCCGGTGTTGGAAGGT 81574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472506145267
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |