Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= AAMG01001198.1 Length=123 Score E Sequences producing significant alignments: (Bits) Value seq12652 156 2e-36 >seq12652 Length=50699 Score = 156 bits (172), Expect = 2e-36 Identities = 109/123 (89%), Gaps = 1/123 (1%) Strand=Plus/Minus Query 1 TGGAGGTTTCTTCTCCTAGTTTGGACAAGACCCCACAATCTACAGCGGAAAATGGAGTTT 60 |||||||||||||||||| |||||| ||||||||||||||| | || |||||||| || | Sbjct 39976 TGGAGGTTTCTTCTCCTAATTTGGAGAAGACCCCACAATCTGCTGCTGAAAATGGTGTAT 39917 Query 61 CCTTATATGGATTTGGGTGCTTCTGTACAAAGTTTGCCGGTGGTAACAGATCCGGTACCG 120 | |||||| ||||| ||||||||||||||||||||||||| | | |||||||||||||| Sbjct 39916 CTTTATAT-GATTTAAGTGCTTCTGTACAAAGTTTGCCGGTTGCATCAGATCCGGTACCG 39858 Query 121 GAG 123 ||| Sbjct 39857 GAG 39855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295006396470