Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05]
929,607 sequences; 2,689,351,490 total letters
Query= AAMG01001756.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq927729 360 3e-97
>seq927729
Length=1990
Score = 360 bits (398), Expect = 3e-97
Identities = 266/310 (86%), Gaps = 3/310 (1%)
Strand=Plus/Plus
Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60
|||||||||| ||||| ||||||||||||||||| |||||||||||||||| || ||||
Sbjct 827 CGAGTCAATGCCCTAGAGCATGTGTAGGGGTGGGCAAAAATGGAAATTTGATTTGCTGGG 886
Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120
|| |||||||||||||||||||||||||| || ||||| || ||||||||| ||||||
Sbjct 887 CTGAATCCGACCCGAATGTTAAAGTCGGAGCTTGTGGTGTTGACCTTGGTGATCGGACCT 946
Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180
|||| |||||||||| |||||||| ||||| ||||| || ||||| || || |||| ||
Sbjct 947 TGGTAACCGGGTCGGCCTATCAAGGAGCCCCGCATGGATTTTTCTTTGTGAAAAACAGCA 1006
Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240
| || || |||||||||||||||||| || |||||||||||||| ||||| || ||||
Sbjct 1007 AGAAAGAAGGGCAAAATAGTAAATTGGTGAAAATTGATGTTCCTGAGGAATTCTCAGGAT 1066
Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATTGTAA---GT 297
||||||||||||||||||||||||||||||||||||||| || || ||||| ||| ||
Sbjct 1067 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGTATAATGTTATTATAATTTGT 1126
Query 298 ATTTATGTAA 307
| |||||||
Sbjct 1127 AAGTATGTAA 1136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 909862489312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |