Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq927729 360 3e-97 >seq927729 Length=1990 Score = 360 bits (398), Expect = 3e-97 Identities = 266/310 (86%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||||||||| ||||| ||||||||||||||||| |||||||||||||||| || |||| Sbjct 827 CGAGTCAATGCCCTAGAGCATGTGTAGGGGTGGGCAAAAATGGAAATTTGATTTGCTGGG 886 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 || |||||||||||||||||||||||||| || ||||| || ||||||||| |||||| Sbjct 887 CTGAATCCGACCCGAATGTTAAAGTCGGAGCTTGTGGTGTTGACCTTGGTGATCGGACCT 946 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 |||| |||||||||| |||||||| ||||| ||||| || ||||| || || |||| || Sbjct 947 TGGTAACCGGGTCGGCCTATCAAGGAGCCCCGCATGGATTTTTCTTTGTGAAAAACAGCA 1006 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 | || || |||||||||||||||||| || |||||||||||||| ||||| || |||| Sbjct 1007 AGAAAGAAGGGCAAAATAGTAAATTGGTGAAAATTGATGTTCCTGAGGAATTCTCAGGAT 1066 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATTGTAA---GT 297 ||||||||||||||||||||||||||||||||||||||| || || ||||| ||| || Sbjct 1067 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGTATAATGTTATTATAATTTGT 1126 Query 298 ATTTATGTAA 307 | ||||||| Sbjct 1127 AAGTATGTAA 1136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 909862489312