Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq508016 145 6e-30 >seq508016 Length=803 Score = 145 bits (160), Expect = 6e-30 Identities = 348/523 (67%), Gaps = 5/523 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||||| || ||| || |||||||| | ||||| |||||||| Sbjct 280 ATTTGGGAAATGTACAAAAAAGCCTTAGCCTCTTTCTGGACTGCTGAGGAAGTCGATTTA 339 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 || ||| | | ||||||| || | ||| ||| |||||||| | ||| Sbjct 340 TCTTCAGATACCCGTCACTGGGAAACCCTAACTCCCGGCGAAAGGCATTTCATCACTCAT 399 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || || || ||||| || ||||| ||||| || || || | | | ||| Sbjct 400 GTCCTTGCCTTTTTCGCCGCCTCAGACGGCATCGTTTTAGAAAACCTAGCCGGAAGGTTC 459 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | | || || ||||| ||||||||||| ||||||||||||||| || || || || Sbjct 460 ATGAAAGAAGTCCAAGTTGCGGAGGCGCGTGCTTTCTACGGCTTCCAAATCGCGATTGAA 519 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGA 61385 || |||| || |||||||||||| | || | || ||||||||| ||| | | | | Sbjct 520 AACATCCATTCCGAGATGTACAGTCTGCTTCTAGAGTCGTACATCAAGGACTCTGAAGAA 579 Query 61386 ACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTG 61445 | | | |||||||| || | ||||| || || || || ||| ||| | || Sbjct 580 AAAAGCA-GATTGTTCCGCGCAGTTGAGACTATCCCCTGTGTTGAGAAGAAGGCGAAGTG 638 Query 61446 GGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGC 61505 |||| | ||||||| | || | | ||||||| || || ||| | |||||||| Sbjct 639 GGCCCTACGTTGGATCGACGGT---TCCGAAACATTTGCGGAGCGTTTGGTTGCATTTGC 695 Query 61506 GGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACG 61565 || || ||| | ||||| |||| || || || || ||||| || || || Sbjct 696 TTGTGTGGAAGGTATTTTTTTTTCTGGAAGCTTCTGTGCTATATTCTGGTTAAAAAAGCG 755 Query 61566 TGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 || | ||||| || | |||||| || |||||||| ||| Sbjct 756 GGGGTTAATGCCTGGATTAACCTTCTCGAACGAGTTGATTTCA 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393063719426480