Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq252174 131 9e-29 seq29223 131 9e-29 seq201203 116 2e-24 seq175671 116 2e-24 seq126961 116 2e-24 seq183972 113 3e-23 seq173623 113 3e-23 seq190004 107 1e-21 seq124892 104 1e-20 seq29947 104 1e-20 seq108291 87.8 1e-15 seq139003 80.6 1e-13 >seq252174 Length=3600 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || |||||| || Sbjct 720 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 661 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 660 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 604 >seq29223 Length=4313 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| ||||| || |||||| || Sbjct 1425 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1366 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1365 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1309 >seq201203 Length=15464 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||| || ||||| || |||||| || Sbjct 3590 GAACCCAAAAACTTTGATTTCTCATAAGGTGTCGGCAGAGTCCTAAAAGCAACATCCGCC 3649 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||| |||| ||||| |||| |||||| |||||||||||||| ||||||| Sbjct 3650 GATCCCTGGTCAGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCATCTTCGA 3706 >seq175671 Length=46863 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||| | ||||| || |||||| | Sbjct 34075 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTAAAAGCAACATCCGTC 34016 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| ||||| |||||||||||||||||||||| Sbjct 34015 GATCCCTGGTCGGCATTGTTTATGGTTGTGACTAGGACGGTATCTGATCGTCTTCGA 33959 Score = 107 bits (118), Expect = 1e-21 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||| ||||||| ||| ||||| ||| || |||||| Sbjct 16695 GAACCCAAAAACTTTGATTTCTCATAAGGTGTCGACAGAGTCCTAAAAGA-AACATCCAT 16637 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| ||| |||| |||||| |||||||||||||| ||||||| Sbjct 16636 TGATCCCTGGTCGACATCTATTATGGTTGAGACTAGGACGGTATCTGATCATCTTCGA 16579 >seq126961 Length=223 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||| || ||||| || |||||| || Sbjct 4 GAACCCAAAAACTTTGATTTCTCATAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGCC 63 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||||||| |||| |||| |||||| |||||||||||||||||||||| Sbjct 64 AATCCCTGGTCGGCATCATTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 120 >seq183972 Length=62359 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| | ||||||||||| ||| || ||| ||||| || |||||| | Sbjct 35572 GAACCCAAAAATTTTGATTTCTCATAAAGTTCCGGCGGAGTCCTAAAAGCAACATCTGCA 35631 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 35632 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 35688 >seq173623 Length=49664 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||| ||| ||||||||||||| ||||||| || ||||| || |||||| | Sbjct 40400 GAACCTAAAAACTTTGATTTCTCATAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGTC 40459 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||| |||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 40460 GATCCCTGGTCAGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 40516 >seq190004 Length=55059 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| |||| || |||||| || Sbjct 12099 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGTCAAAGTCCTAAAAGCAACATCCACC 12158 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| |||| |||| |||||| |||| |||||||| |||||||| Sbjct 12159 GATCCCTGGTCGACATTATTTATGGTTGAGACTAGGACGATATCTGATTGTCTTCGA 12215 >seq124892 Length=63263 Score = 104 bits (114), Expect = 1e-20 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| |||||||||| | |||||||||| ||| | | ||||||| || Sbjct 56156 GAGCCCAAAAACTTTGATTTTTGATAAGGTGCCGGCGGAGACCTTAAAGTAACATCCGCC 56215 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| || |||||||||||||| |||| Sbjct 56216 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGATGGTATCTGATCGTCCTCGA 56272 >seq29947 Length=51136 Score = 104 bits (114), Expect = 1e-20 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||| ||| || ||||| || ||||| | Sbjct 12997 GAACCCAAAAACTTTGATTTCTCATAAAGTGTCGGTGGAGTCCTAAAAGCAACATTCGTC 12938 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| ||||| |||| |||||| |||| ||||||||||||||||| Sbjct 12937 GATCCCTGGTCGTCATCGTTTATGGTTGAGACTAGGACGATATCTGATCGTCTTCGA 12881 >seq108291 Length=144878 Score = 87.8 bits (96), Expect = 1e-15 Identities = 88/117 (75%), Gaps = 12/117 (10%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| || | ||| || Sbjct 127687 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGANT------------ATCCGCC 127734 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| |||| |||| ||| || || |||||||||||||||||| Sbjct 127735 GATCCCTGGTCGGCATCATTTATGGTTGAGAGTAGGATAGTATCTGATCGTCTTCGA 127791 >seq139003 Length=312848 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||||| ||||||||| |||| ||| |||| |||| |||||| ||||||||||||||| Sbjct 166944 AACATCCGCCGATCCCTGGTCGACATCATTTATGGTTGAGACTAGGACGGTATCTGATCG 167003 Query 111 TCTTCGA 117 ||||||| Sbjct 167004 TCTTCGA 167010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277737274020