Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq158038 77.0 3e-12 >seq158038 Length=20913 Score = 77.0 bits (84), Expect = 3e-12 Identities = 126/178 (71%), Gaps = 8/178 (4%) Strand=Plus/Plus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||||||||| ||||||| | ||| ||| ||||||||| ||| | | ||| ||| || Sbjct 8107 ACGGTGGATACCTAGGCGTCCAGAGACGAGGAAGGACGTAGTAATCGACAAAATGCTTCG 8166 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC---CGATATATT 122 || | | | | ||| | || |||||| ||| |||||| |||||||| ||| | | Sbjct 8167 GGAAGTTGAAAATAAGTATAGATCCGGGGATTCCCGAATAGGGCAACCTTTCGA---ACT 8223 Query 123 GGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | ||| ||| || | |||| || | ||| ||| |||||||||||||| |||| Sbjct 8224 GCTGATGAATC-TATGGGCAGGCAAGAGAC-AACCTGGCGAACTGAAACATCTTAGTA 8279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476022867107