Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq157315 75.2 5e-12 seq139244 75.2 5e-12 seq104126 75.2 5e-12 seq67668 75.2 5e-12 seq27717 75.2 5e-12 seq165266 71.6 6e-11 seq159687 71.6 6e-11 seq128078 71.6 6e-11 seq124528 71.6 6e-11 seq78952 71.6 6e-11 seq65039 71.6 6e-11 >seq157315 Length=44861 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 1249 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 1307 >seq139244 Length=60618 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 41914 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 41972 >seq104126 Length=15269 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 14046 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 13988 >seq67668 Length=9046 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 263 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 205 >seq27717 Length=10568 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 9141 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 9199 >seq165266 Length=6528 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||| | || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 419 GGAAAAGAAATTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 361 >seq159687 Length=25966 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| ||| ||||| |||||||| Sbjct 24121 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAATCGGGAACAGCCCAGC 24179 >seq128078 Length=105297 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| || ||||| Sbjct 11904 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGTCCAGC 11846 >seq124528 Length=31335 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| ||||||| ||||||||| ||||| | |||||| Sbjct 27484 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGACGAGTGAACCGGGAACAACCCAGC 27426 >seq78952 Length=2216 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||| ||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 195 GGAAAATAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 137 >seq65039 Length=10911 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || ||||||||| |||||||||||| |||| ||||| | |||||| Sbjct 2035 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACATCCCAGC 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230036586480