Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq165428 75.2 7e-12 seq140669 75.2 7e-12 seq104126 75.2 7e-12 seq45249 75.2 7e-12 seq10487 75.2 7e-12 seq114382 73.4 2e-11 seq165266 71.6 8e-11 seq144272 71.6 8e-11 seq144163 71.6 8e-11 seq128078 71.6 8e-11 seq101195 71.6 8e-11 seq76805 71.6 8e-11 seq2494 71.6 8e-11 >seq165428 Length=51920 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 5419 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 5362 Query 122 GCT 124 ||| Sbjct 5361 GCT 5359 >seq140669 Length=66234 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 8477 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 8420 Query 122 GCT 124 ||| Sbjct 8419 GCT 8417 >seq104126 Length=15269 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||||| |||||||| | |||||||| Sbjct 14827 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCCGGGACGTAGT-CAACGCAA 14884 Query 122 GCT 124 ||| Sbjct 14885 GCT 14887 >seq45249 Length=21943 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 3166 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 3109 Query 122 GCT 124 ||| Sbjct 3108 GCT 3106 >seq10487 Length=3643 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 1613 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1556 Query 122 GCT 124 ||| Sbjct 1555 GCT 1553 >seq114382 Length=20502 Score = 73.4 bits (80), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| || |||||| |||| || |||||| ||||||||| ||| |||||||||| Sbjct 6837 TCCGAACATT-TCACTAGATCATT-CAAACGGTAG-AAGCGACGGACGGTGTGTACAAAG 6781 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| | |||||| |||| Sbjct 6780 GGCAGGGACGTAGT-CAACGCGAGCT 6756 >seq165266 Length=6528 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||| |||||||||| | |||||| | Sbjct 1243 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGACAGGGACGTAGT-CAACGCGA 1300 Query 122 GCT 124 ||| Sbjct 1301 GCT 1303 >seq144272 Length=32835 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||| |||||||||||||||| | |||||| | Sbjct 944 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTAAAAAGGGCAGGGACGTAGT-CAACGCGA 1001 Query 122 GCT 124 ||| Sbjct 1002 GCT 1004 >seq144163 Length=111769 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||||||||||| || | |||||| | Sbjct 55363 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACATAGT-CAACGCGA 55306 Query 122 GCT 124 ||| Sbjct 55305 GCT 55303 >seq128078 Length=105297 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||| ||| | |||||| | Sbjct 12737 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGT-CAACGCGA 12794 Query 122 GCT 124 ||| Sbjct 12795 GCT 12797 >seq101195 Length=28519 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| | ||||| || |||||||||| |||||||||||||||||||||| | |||||| | Sbjct 9179 TTCAATTGGTAGGAA-CGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 9122 Query 122 GCT 124 ||| Sbjct 9121 GCT 9119 >seq76805 Length=1698 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||| ||||||||||| | |||||| | Sbjct 1599 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGCGCAGGGACGTAGT-CAACGCGA 1656 Query 122 GCT 124 ||| Sbjct 1657 GCT 1659 >seq2494 Length=14703 Score = 71.6 bits (78), Expect = 8e-11 Identities = 54/61 (89%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 6680 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 6737 Query 122 G 122 | Sbjct 6738 G 6738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300325543460