Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29]
168,247 sequences; 3,643,471,356 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq5722 80.6 3e-13
seq67668 77.0 4e-12
seq33074 77.0 4e-12
seq2494 77.0 4e-12
seq165428 75.2 1e-11
seq158276 75.2 1e-11
seq142435 75.2 1e-11
seq139244 75.2 1e-11
seq123401 75.2 1e-11
seq104126 75.2 1e-11
seq78952 75.2 1e-11
seq65039 75.2 1e-11
seq45249 75.2 1e-11
seq10487 75.2 1e-11
seq129544 73.4 5e-11
seq27717 73.4 5e-11
>seq5722
Length=281180
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 169179 CCAACATAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 169237
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 169238 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 169275
Score = 75.2 bits (82), Expect = 1e-11
Identities = 64/78 (82%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92
|||||| | |||| |||||||||||||| | | ||||| || |||||||| ||||||||
Sbjct 164395 TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAA 164336
Query 93 TTTTCTCAAGGTAAAAGT 110
||| |||| |||| |||
Sbjct 164335 TTTCTTCAAAGTAACAGT 164318
>seq67668
Length=9046
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||| || || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 2099 CCAACGTAATACGGCCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2157
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|| |||||||| ||||||||||| |||| |||| |||
Sbjct 2158 GGCTTGCTTTGATCACTCTAATTTCTTCAAAGTAACAGT 2196
>seq33074
Length=20930
Score = 77.0 bits (84), Expect = 4e-12
Identities = 78/99 (79%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||| ||||||||| | | |||||
Sbjct 4337 CCAACATAATAGG-ACTGAAATCCTATAATGTTATCCCATACTAATGTATACAGAGCGTA 4395
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|| |||||||| ||||||||||| |||| |||| |||
Sbjct 4396 TGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 4434
>seq2494
Length=14703
Score = 77.0 bits (84), Expect = 4e-12
Identities = 76/97 (78%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72
||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||
Sbjct 7504 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGACGTAG 7562
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 7563 GCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7599
>seq165428
Length=51920
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 4550 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4492
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 4491 TGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAATAG 4454
>seq158276
Length=34550
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | ||| |
Sbjct 12884 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGCA 12826
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
||| |||||||| ||||||||||| |||| |||| ||
Sbjct 12825 AGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 12788
>seq142435
Length=3115
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1143 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1201
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 1202 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1239
>seq139244
Length=60618
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 40286 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 40228
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 40227 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 40190
>seq123401
Length=2673
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 820 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 878
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 879 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 916
>seq104126
Length=15269
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 2744 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2802
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 2803 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2840
>seq78952
Length=2216
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1866 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1924
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 1925 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1962
>seq65039
Length=10911
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 3669 CCAACCTAATAGG-ACTGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 3727
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 3728 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 3765
>seq45249
Length=21943
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 2341 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2283
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 2282 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2245
>seq10487
Length=3643
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 683 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 625
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 624 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 587
>seq129544
Length=186279
Score = 73.4 bits (80), Expect = 5e-11
Identities = 80/104 (77%), Gaps = 2/104 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | |||||
Sbjct 57739 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAAAGCGTA 57797
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115
|| |||||||| ||||||||||| |||| |||| || ||||
Sbjct 57798 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCTGG 57841
>seq27717
Length=10568
Score = 73.4 bits (80), Expect = 5e-11
Identities = 76/97 (78%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72
|||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 8305 CAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAG 8247
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 8246 GCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594229887798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |