Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq5722 80.6 3e-13 seq67668 77.0 4e-12 seq33074 77.0 4e-12 seq2494 77.0 4e-12 seq165428 75.2 1e-11 seq158276 75.2 1e-11 seq142435 75.2 1e-11 seq139244 75.2 1e-11 seq123401 75.2 1e-11 seq104126 75.2 1e-11 seq78952 75.2 1e-11 seq65039 75.2 1e-11 seq45249 75.2 1e-11 seq10487 75.2 1e-11 seq129544 73.4 5e-11 seq27717 73.4 5e-11 >seq5722 Length=281180 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 169179 CCAACATAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 169237 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 169238 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 169275 Score = 75.2 bits (82), Expect = 1e-11 Identities = 64/78 (82%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92 |||||| | |||| |||||||||||||| | | ||||| || |||||||| |||||||| Sbjct 164395 TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAA 164336 Query 93 TTTTCTCAAGGTAAAAGT 110 ||| |||| |||| ||| Sbjct 164335 TTTCTTCAAAGTAACAGT 164318 >seq67668 Length=9046 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||| || || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2099 CCAACGTAATACGGCCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2157 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 2158 GGCTTGCTTTGATCACTCTAATTTCTTCAAAGTAACAGT 2196 >seq33074 Length=20930 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||| ||||||||| | | ||||| Sbjct 4337 CCAACATAATAGG-ACTGAAATCCTATAATGTTATCCCATACTAATGTATACAGAGCGTA 4395 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || |||||||| ||||||||||| |||| |||| ||| Sbjct 4396 TGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGT 4434 >seq2494 Length=14703 Score = 77.0 bits (84), Expect = 4e-12 Identities = 76/97 (78%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72 ||||| |||||| || | |||||| | |||| |||||||||||||| | | |||| Sbjct 7504 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGACGTAG 7562 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 7563 GCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7599 >seq165428 Length=51920 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 4550 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 4492 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 4491 TGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAATAG 4454 >seq158276 Length=34550 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||| | Sbjct 12884 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGCA 12826 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 ||| |||||||| ||||||||||| |||| |||| || Sbjct 12825 AGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 12788 >seq142435 Length=3115 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1143 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1201 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1202 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1239 >seq139244 Length=60618 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 40286 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 40228 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 40227 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 40190 >seq123401 Length=2673 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 820 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 878 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 879 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 916 >seq104126 Length=15269 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2744 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2802 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2803 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2840 >seq78952 Length=2216 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1866 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 1924 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1925 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1962 >seq65039 Length=10911 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 3669 CCAACCTAATAGG-ACTGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 3727 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 3728 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 3765 >seq45249 Length=21943 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2341 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 2283 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2282 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2245 >seq10487 Length=3643 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 683 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 625 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 624 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 587 >seq129544 Length=186279 Score = 73.4 bits (80), Expect = 5e-11 Identities = 80/104 (77%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | ||||| Sbjct 57739 CCAACGTAATAGG-ACCAAAATCCTATAATGTTATCCCATGCTAATGTATACAAAGCGTA 57797 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || |||||||| ||||||||||| |||| |||| || |||| Sbjct 57798 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCTGG 57841 >seq27717 Length=10568 Score = 73.4 bits (80), Expect = 5e-11 Identities = 76/97 (78%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72 |||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 8305 CAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAG 8247 Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 8246 GCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 8210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594229887798