Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq120678 91.5 1e-16 seq118545 91.5 1e-16 seq168246 87.8 1e-15 seq138088 87.8 1e-15 seq136242 87.8 1e-15 seq67170 87.8 1e-15 seq50936 87.8 1e-15 seq28482 87.8 1e-15 seq158123 84.2 2e-14 seq100806 82.4 5e-14 seq150008 78.8 7e-13 seq10624 78.8 7e-13 seq8818 77.0 2e-12 seq129949 73.4 3e-11 seq125794 73.4 3e-11 seq103144 73.4 3e-11 seq78260 71.6 1e-10 >seq120678 Length=45978 Score = 91.5 bits (100), Expect = 1e-16 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||||||||||||||||||||||| ||| ||| |||||||||| | || Sbjct 19826 TAACTTTTATCCGTTGAGCGATGGCCCTTCCACTCAACACCATCGGATCACTAAGGCCGA 19767 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | | | ||| |||||| | ||| | || ||||||| Sbjct 19766 CTTTCGTCCCTGCTCGATGGGTGGGTATTGCAGTCAAGCTCCCTTCTACCTTTGCACT 19709 >seq118545 Length=45088 Score = 91.5 bits (100), Expect = 1e-16 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||| ||| |||||||||| ||| ||| |||||||||| | || Sbjct 26425 TAACTTTTATCCGTTGAACGACGGCCCTTCCACTCAGCACCATCGGATCACTAAGGCCGA 26484 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | |||| ||| ||| |||||| | ||| | || ||||||| Sbjct 26485 CTTTCGTCCCTGCTCGATGGGTTGGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCACT 26542 >seq168246 Length=155943 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 108787 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 108728 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 108727 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 108670 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 133843 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 133902 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 133903 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 133960 >seq138088 Length=57446 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 39200 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 39141 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 39140 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 39083 >seq136242 Length=24675 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 9557 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 9498 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 9497 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 9440 >seq67170 Length=7092 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 3799 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 3740 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 3739 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 3682 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 5640 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 5581 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 5580 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 5523 >seq50936 Length=66930 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 13340 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 13399 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 13400 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 13457 >seq28482 Length=17784 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 14542 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 14483 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 14482 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 14425 >seq158123 Length=12238 Score = 84.2 bits (92), Expect = 2e-14 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 6433 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 6374 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 ||||| ||||| | || | ||| |||||||||| | ||| |||| |||||||| Sbjct 6373 CTTTCATCCCTGCTAGACGGGTGGGTCTTGCAATCAAGCTCCCTTCTGCCTTTGCACTA 6315 >seq100806 Length=104595 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||| |||||||||||| || || |||||||||||| || Sbjct 3176 TAACTTTTATCCGTTGAGCTATGGCCCTTCCACTCGGCACCGTCGGATCACTATGGCCAA 3235 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||||| || ||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 3236 ATTTCGTCCCTACTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 3293 >seq150008 Length=345021 Score = 78.8 bits (86), Expect = 7e-13 Identities = 88/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||| |||||||| | ||| |||||||||| | || Sbjct 108488 TAACTTTTATCCGTTGAGCGATGACCCTTCCACTTGGCACCATCGGATCACTAAGGCCGA 108547 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| ||||| | | | ||| ||| |||||| | ||| |||| ||||||| Sbjct 108548 CTTTCGTCCCTGCTTGACGGATGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 108605 >seq10624 Length=150917 Score = 78.8 bits (86), Expect = 7e-13 Identities = 85/113 (75%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||| ||||||||||||| |||||||||| | | ||||||||||||| || Sbjct 15566 TACCTTTGATCCGTTGAGCGAGAGCCCTTCCATACGGGACTCCCGGATCACTATGGCCGA 15507 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATT 113 |||||| |||| || | || | |||| || ||||||| ||| | ||||| Sbjct 15506 CTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAAGCAGGCTTATACCATT 15454 >seq8818 Length=6872 Score = 77.0 bits (84), Expect = 2e-12 Identities = 90/120 (75%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || ||| || ||||||| | | Sbjct 6651 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCATCGAATCACTAAGGCTGA 6710 Query 61 CTTTCGCATCTGCTCTA--GTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | |||| | ||| ||| ||||| | ||| |||| ||||||| Sbjct 6711 CTTTCGTCCCTGCTCGACGGTTG--GGTCTTGCAGTCAAGATCCCTTCTGCCTTTGCACT 6768 >seq129949 Length=17522 Score = 73.4 bits (80), Expect = 3e-11 Identities = 87/118 (74%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | | Sbjct 294 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGACGA 353 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 354 CTTTTGTCCCTGATCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 411 >seq125794 Length=40488 Score = 73.4 bits (80), Expect = 3e-11 Identities = 87/118 (74%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||| ||||||||||| |||||||| || || || ||||||| | || Sbjct 38910 TAACTTTTATCTGTTGAGCGATGACCCTTCCACTCGGTACCGTCGAATCACTAAGGCCGA 38969 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | || |||| ||||||| Sbjct 38970 CTTTCGTCCCTGCTCGATGGGTGGGTCTTGCAGTCAAGCTCCTTTCTGCCTTTGCACT 39027 >seq103144 Length=45195 Score = 73.4 bits (80), Expect = 3e-11 Identities = 84/113 (74%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 6 TTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTC 65 ||||||||||||| || |||||||||| || || |||||||||| | | ||||| Sbjct 35572 TTTATCCGTTGAGTGACGGCCCTTCCACTCGGTACCGTCGGATCACTAAGGCTGACTTTC 35631 Query 66 GCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 | |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 35632 GTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 35684 >seq78260 Length=8638 Score = 71.6 bits (78), Expect = 1e-10 Identities = 89/121 (74%), Gaps = 6/121 (5%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACC---GGATCACTATGAC 57 || ||||||||||||||| || |||||||||| || | || | ||||||||| | | Sbjct 471 TAACTTTTATCCGTTGAGTGACGGCCCTTCCACTC---GACATCGTTGGATCACTAAGGC 527 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 |||||| |||||| | || | ||| ||| |||||| | ||| | ||||||||| Sbjct 528 TGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTACCATTGCAC 587 Query 118 T 118 | Sbjct 588 T 588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351444784900