Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29]
168,247 sequences; 3,643,471,356 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq142435 127 2e-27
seq139244 127 2e-27
seq123401 127 2e-27
seq104126 127 2e-27
seq10487 127 2e-27
seq45249 122 9e-26
seq27717 122 9e-26
seq32042 118 1e-24
seq18738 118 1e-24
seq159815 116 4e-24
seq78952 116 4e-24
seq124528 113 5e-23
seq65039 113 5e-23
seq129544 111 2e-22
seq5722 111 2e-22
seq2494 111 2e-22
seq164480 109 6e-22
seq67668 105 7e-21
seq116782 104 2e-20
seq101266 104 2e-20
seq165428 100 3e-19
seq113020 100 3e-19
seq104678 96.9 4e-18
seq64579 96.9 4e-18
seq33074 96.9 4e-18
seq101195 95.1 1e-17
seq144163 89.7 5e-16
seq108387 77.0 3e-12
seq55538 73.4 4e-11
>seq142435
Length=3115
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 1239 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1180
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 1179 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1122
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 1121 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1062
Query 190 T 190
|
Sbjct 1061 T 1061
>seq139244
Length=60618
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 40190 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 40249
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 40250 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 40307
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 40308 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 40367
Query 190 T 190
|
Sbjct 40368 T 40368
>seq123401
Length=2673
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 916 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 857
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 856 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 799
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 798 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 739
Query 190 T 190
|
Sbjct 738 T 738
>seq104126
Length=15269
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 2840 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2781
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 2780 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 2723
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 2722 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 2663
Query 190 T 190
|
Sbjct 2662 T 2662
>seq10487
Length=3643
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 587 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 646
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 647 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 704
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 705 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 764
Query 190 T 190
|
Sbjct 765 T 765
>seq45249
Length=21943
Score = 122 bits (134), Expect = 9e-26
Identities = 138/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 2245 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2304
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| | |||||||
Sbjct 2305 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCAGA-GTAATGA 2362
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 2363 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 2422
Query 190 T 190
|
Sbjct 2423 T 2423
>seq27717
Length=10568
Score = 122 bits (134), Expect = 9e-26
Identities = 138/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 8210 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 8269
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || | | ||| || |||||||
Sbjct 8270 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGTCCTTCGGGATCGGA-GTAATGA 8327
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 8328 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8387
Query 190 T 190
|
Sbjct 8388 T 8388
>seq32042
Length=240519
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| ||||| | | |||||| |||
Sbjct 104992 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTAGACATTAGCAT 105051
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| ||| | | ||| | |||||||
Sbjct 105052 GGGATAACATTATAGGATTT-CGGTCCTATTATGTTAGCCTTGGGGATTGGA-GTAATGA 105109
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| |||| |||| | ||||| || |||| ||||||||||||||||||||
Sbjct 105110 TTAACAGGGACAGTCAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 105169
Query 190 T 190
|
Sbjct 105170 T 105170
>seq18738
Length=25644
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||| | |||| |||| | |||||||| |||
Sbjct 582 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTACGCTCTGTATACATTAGCAT 641
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || ||| |||
Sbjct 642 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTATTGA 699
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||| ||||| ||| | ||||| || |||| ||||||||||||||||||||
Sbjct 700 TTAATAAGGACAGTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 759
Query 190 T 190
|
Sbjct 760 T 760
>seq159815
Length=56902
Score = 116 bits (128), Expect = 4e-24
Identities = 139/182 (76%), Gaps = 5/182 (3%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| ||||||| || | ||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 39400 CTGTTACTTTAAAGATATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 39459
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATG 128
| |||| | |||||| | |||||||||| || | | ||| || | || ||||||
Sbjct 39460 GAGATAACATTATAGGATTT-CGGTTCTATTACGTTGTTCTTCGAG-ATCGAA-GTAATG 39516
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| || | ||| ||||||||| | ||||| || ||||||||| ||||||||||||||
Sbjct 39517 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAAAGGTAAAATTCTTGGATTT 39576
Query 189 AT 190
||
Sbjct 39577 AT 39578
>seq78952
Length=2216
Score = 116 bits (128), Expect = 4e-24
Identities = 136/180 (76%), Gaps = 3/180 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 1962 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1903
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||||| || || | ||| || |||||||
Sbjct 1902 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1845
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| |||| |||| | ||||| || |||| |||||||||||||| |||||
Sbjct 1844 TTAACAGGGACAGTCTGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGTATTTA 1785
>seq124528
Length=31335
Score = 113 bits (124), Expect = 5e-23
Identities = 137/182 (75%), Gaps = 5/182 (3%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | | |||||| |||| |||| | |||||||| |||
Sbjct 29030 CTGTTACTTTGAAGAAATTAGAGTGCTTAAAGCAAGCCTACGCTCTGTATACATTAGCAT 28971
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATG 128
|| |||| | |||||| | | || | ||| || || ||| || | | ||||||
Sbjct 28970 GGGATAACATTATAGGATTT-CAGTCCAATTACGTTGGCCTTCGAGATCGGA--GTAATG 28914
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||
Sbjct 28913 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 28854
Query 189 AT 190
||
Sbjct 28853 AT 28852
>seq65039
Length=10911
Score = 113 bits (124), Expect = 5e-23
Identities = 136/181 (75%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 3765 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 3706
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | | || ||||| || || | ||| | |||||||
Sbjct 3705 GGGATAACATTATAGGATTT-CAGTCCTATTAGGTTGGCGTTCGGGATAGGA-GTAATGA 3648
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | | | ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 3647 TTAACAGGAACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 3588
Query 190 T 190
|
Sbjct 3587 T 3587
>seq129544
Length=186279
Score = 111 bits (122), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 3/187 (2%)
Strand=Plus/Minus
Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63
|||| || |||||||||| ||||||||| | |||||||| |||| ||| | ||||||
Sbjct 57841 CCAGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACAT 57782
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
|| ||||| |||| | |||||| | ||| ||||| || || | ||| | |
Sbjct 57781 TAGCATGGGATAACATTATAGGATTTT-GGTCCTATTACGTTGGCCTTCGGGATCAGA-G 57724
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| || | ||| |||| |||| | ||||| || |||| ||||||||||||||
Sbjct 57723 TAATGATTAACAAGGACAGTCAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTG 57664
Query 184 GATTTAT 190
|||||||
Sbjct 57663 GATTTAT 57657
>seq5722
Length=281180
Score = 111 bits (122), Expect = 2e-22
Identities = 136/182 (75%), Gaps = 3/182 (2%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68
||| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||
Sbjct 164318 ACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCA 164377
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
||| |||| | |||||| | || | |||| || || | ||| | ||||||
Sbjct 164378 TGGGATAACATTATAGGATTT-CGATCCTATAACGTTGGCCTTCGGGATAGGA-GTAATG 164435
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| || | ||| ||||||||| | ||||| || |||| ||||||||||||| |||||
Sbjct 164436 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTTGATTT 164495
Query 189 AT 190
||
Sbjct 164496 AT 164497
>seq2494
Length=14703
Score = 111 bits (122), Expect = 2e-22
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70
|| |||||||||| ||||||||| | |||||||| |||| | | |||||||| ||||
Sbjct 7599 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGTCTGTATACATTAGCATG 7540
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
| |||| | |||||| | |||| ||||| || || | ||| || ||||||||
Sbjct 7539 GGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGAT 7482
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| | ||| ||||||||| | |||| || |||| ||||||||||||||| |||||
Sbjct 7481 TAACAGGGACAGTCGGGGGAATTGATATTTCATAGTCAGAGGTGAAATTCTTGGTTTTAT 7422
>seq164480
Length=51814
Score = 109 bits (120), Expect = 6e-22
Identities = 135/181 (75%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| || | |||||||| |||
Sbjct 32682 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGTATACATTAGCAT 32623
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | | | ||||| || || | ||| || |||||||
Sbjct 32622 GGGATAACATTATAGGATTTT-GATCCTATTACGTTGGCCTTCGGGATCGAA-GTAATGA 32565
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||||||||||||| | ||||| || |||| |||||||||||||||||| |
Sbjct 32564 TTAACAAGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTGA 32505
Query 190 T 190
|
Sbjct 32504 T 32504
Score = 102 bits (112), Expect = 8e-20
Identities = 133/180 (74%), Gaps = 3/180 (2%)
Strand=Plus/Minus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATG 70
|||||||||||| ||||||||| | |||||||| |||| ||||| | ||||||| |||
Sbjct 629 TTTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATACATTTGCATA 570
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
| |||| | |||||| | || | ||||| | || | |||| || ||||||||
Sbjct 569 GGATAACATTATAGGA-TTTCGATCCTATTACATTGGCCTTCAGGATCG-GAGTAATGAT 512
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
|| | ||| |||||| || | ||||| | || | |||| ||||||||||||||||
Sbjct 511 TAACATGGACAGTCGGCGGCATTCGTATTTCTTAGTTAGAGGTAAAATTCTTGGATTTAT 452
>seq67668
Length=9046
Score = 105 bits (116), Expect = 7e-21
Identities = 135/182 (74%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68
||| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||
Sbjct 2196 ACTGTTACTTTGAAGAAATTAGAGTGATCAAAGCAAGCCTACGCTCTGTATACATTAGCA 2137
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
||| |||| | |||||| | ||| |||| || || | ||| | ||||||
Sbjct 2136 TGGGATAACATTATAGGATTT-CGGCCGTATTACGTTGGCCTTCGGGATTGGA-GTAATG 2079
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| | | ||| ||||||||| | ||||| || |||| |||| ||||||||||||||
Sbjct 2078 ATTAGCAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTCAAATTCTTGGATTT 2019
Query 189 AT 190
||
Sbjct 2018 AT 2017
>seq116782
Length=283846
Score = 104 bits (114), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||
Sbjct 226801 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAATCCTACGCTCTGTATACATTATCAT 226742
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| ||| | |||||| | |||| ||||| || | | | || || |||||||
Sbjct 226741 GGGATATCATTATAGGATTT-CGGTCCTATTACGTTGTCCTTCACGATCGGA-GTAATGA 226684
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| || ||||| ||| | ||||| || || | ||||||||||||||||||||
Sbjct 226683 TTAATAGAGACAGTCGAGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTA 226624
Query 190 T 190
|
Sbjct 226623 T 226623
>seq101266
Length=95454
Score = 104 bits (114), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| ||||||||| ||||||||| | ||||||| ||| ||| | |||||||| |||
Sbjct 86078 CTATTACTTTGAGGAAATTAGAGTGCTCAAAGCTATCCTGCACTCTGTATACATTAGCAT 86137
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| ||| | |||||| | |||| ||||| || || | ||| | |||||||
Sbjct 86138 GGGGTAACATTATAGGATTT-CGGTCCTATTACGTGGGCCTTCGGGATCAGA-GTAATGA 86195
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||||||||||||| | ||||| || |||| |||||||||||||| |||||
Sbjct 86196 TTAATAGGGATAGTCGGGGGCATTCGTATTTTATAGTCAGAGGTGAAATTCTTGTATTTA 86255
Query 190 T 190
|
Sbjct 86256 T 86256
>seq165428
Length=51920
Score = 100 bits (110), Expect = 3e-19
Identities = 133/181 (73%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| || ||||||| ||||||||| | |||||||| |||| ||||| | ||||||| |||
Sbjct 38341 CTATTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTGGCAT 38400
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | | || ||||| | || | ||| | ||||| |
Sbjct 38401 GGGATAACATTATAGGATTT-CAGTCCTATTAAATTGGCCTTCGGGATCAGA-GTAATTA 38458
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| ||| || | ||||||||||||| ||||||
Sbjct 38459 TTAACAGGGACAGTCGGGGGCATTCGTATTTAATAGTAAGAGGTGAAATTCTTAGATTTA 38518
Query 190 T 190
|
Sbjct 38519 T 38519
>seq113020
Length=33166
Score = 100 bits (110), Expect = 3e-19
Identities = 133/181 (73%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| |||||||| |||| ||| | |||||||| |||
Sbjct 31024 CTGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 30965
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | || | ||||| || || | ||| || |||||||
Sbjct 30964 GGGATAACATTATAGGATTT-CGATCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 30907
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||| | ||||| || |||| ||||||||||| ||||||||
Sbjct 30906 TTAACAGGGACGATCGGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCATGGATTTA 30847
Query 190 T 190
|
Sbjct 30846 T 30846
>seq104678
Length=256449
Score = 96.9 bits (106), Expect = 4e-18
Identities = 137/188 (73%), Gaps = 5/188 (3%)
Strand=Plus/Plus
Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63
|||| | | |||||||||| ||||||||| | |||||||| |||| ||| | |||||
Sbjct 238598 CCAGCATTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTATGTATACAA 238657
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCC 122
|| | ||| |||||| |||||| | |||| ||||| || ||| ||| || |
Sbjct 238658 TAGCGTGGGATAATATTATAGGATTT-CGGTCCTATTAAGTTGGTCTTCGAGATTGGA-- 238714
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||||||| || | ||| |||| ||| | ||||| || |||| | |||||||||||
Sbjct 238715 GTAATGATTAACATGGACAGTCATGGGCATTCGTATTTCATAGTCACATGTGAAATTCTT 238774
Query 183 GGATTTAT 190
||| |||
Sbjct 238775 AGATATAT 238782
>seq64579
Length=74326
Score = 96.9 bits (106), Expect = 4e-18
Identities = 133/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 34738 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 34797
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
| |||| | |||| | | |||| ||||| || || | ||| || |||||||
Sbjct 34798 GTGATAACATTATAGAATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGAA-GTAATGA 34855
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | |||||| |||| | |||| || |||| ||||||| ||||||||||||
Sbjct 34856 TTAACAGAGATAGTGAGGGGCATTCGTATATCATAGTCAGAGGTGAA-TTCTTGGATTTA 34914
Query 190 T 190
|
Sbjct 34915 T 34915
>seq33074
Length=20930
Score = 96.9 bits (106), Expect = 4e-18
Identities = 136/187 (73%), Gaps = 13/187 (7%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68
||| |||||||||| ||||||||| | |||||||| || | |||| | |||||||| |
Sbjct 4434 ACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCATACGCTCTGTATACATTAGTA 4375
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTC----TAGGACCGCCCG 123
||| |||| | |||||| | | || ||||| ||| || ||| ||||| |
Sbjct 4374 TGGGATAACATTATAGGATTT-CAGTCCTATTATGTTGGCCTTCGAGATAGGA------G 4322
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| || | ||| | || |||| | ||||| || || | |||||||||||||
Sbjct 4321 TAATGATTAACAGGGACAATCAGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTT 4262
Query 184 GATTTAT 190
|||||||
Sbjct 4261 GATTTAT 4255
>seq101195
Length=28519
Score = 95.1 bits (104), Expect = 1e-17
Identities = 132/181 (73%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| ||| | |||||||| |||
Sbjct 8244 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 8303
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | | || ||||| | || | ||| | |||||||
Sbjct 8304 GGGATAACATTATAGGATTT-CAGTCCTATTACATTGGCCTTCGGGATCAGA-GTAATGA 8361
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| | | |||| | ||||| || |||| ||||||||||||||||||||
Sbjct 8362 TTAACAGGGACAATATGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8421
Query 190 T 190
|
Sbjct 8422 T 8422
>seq144163
Length=111769
Score = 89.7 bits (98), Expect = 5e-16
Identities = 129/178 (72%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||||| | |||||||| |||| ||| | ||| |||| |||||
Sbjct 54434 TTACTTTGAAGTAATTAGAGTGCTCAAAGCAAGCCTACACTCTGTATATATTAGCATGGG 54493
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||| | | ||| ||||| ||| || | ||| ||| |||| |
Sbjct 54494 ATAACATTATAGAATTTT-GGTCCTATTATGTTGGCCTTCGGGATTAGA-GTATTGATTA 54551
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||| |||| | ||||| ||| |||| ||||||||||||||||||||
Sbjct 54552 ATAGGGACAGTTAGGGGCATTCGTATTTAATAGTCAGGGGTGAAATTCTTGGATTTAT 54609
>seq108387
Length=150095
Score = 77.0 bits (84), Expect = 3e-12
Identities = 107/145 (74%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCAT 69
|| |||||||||||| ||||||| | |||||||| | | |||| | |||||||| |||
Sbjct 48538 CTGTTACTTTGAAAATATTAGAGTGCTCAAAGCAATCATACGCTCTATATACATTATCAT 48597
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
| |||||| |||||| | ||| ||||| ||| || | ||| | | |||||||
Sbjct 48598 GCGATAATATTATAGGA-TTTAGGTCCTATTATGTTGGCCTTCGGGATC-CGAGTAATGA 48655
Query 130 TAAATACGGATAGTCGGGGGTGTCA 154
| || | || |||| |||||||||
Sbjct 48656 TTAACAGAGACAGTC-GGGGTGTCA 48679
>seq55538
Length=196835
Score = 73.4 bits (80), Expect = 4e-11
Identities = 94/127 (74%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
|| ||||| |||| | |||||| | |||| ||||| || || | ||| || |
Sbjct 43712 TAGCATGGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-G 43769
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| || | ||| ||||||||| | ||||| || |||| ||||||||||||||
Sbjct 43770 TAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 43829
Query 184 GATTTAT 190
|||||||
Sbjct 43830 GATTTAT 43836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511165494880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |