Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq142435 127 2e-27 seq139244 127 2e-27 seq123401 127 2e-27 seq104126 127 2e-27 seq10487 127 2e-27 seq45249 122 9e-26 seq27717 122 9e-26 seq32042 118 1e-24 seq18738 118 1e-24 seq159815 116 4e-24 seq78952 116 4e-24 seq124528 113 5e-23 seq65039 113 5e-23 seq129544 111 2e-22 seq5722 111 2e-22 seq2494 111 2e-22 seq164480 109 6e-22 seq67668 105 7e-21 seq116782 104 2e-20 seq101266 104 2e-20 seq165428 100 3e-19 seq113020 100 3e-19 seq104678 96.9 4e-18 seq64579 96.9 4e-18 seq33074 96.9 4e-18 seq101195 95.1 1e-17 seq144163 89.7 5e-16 seq108387 77.0 3e-12 seq55538 73.4 4e-11 >seq142435 Length=3115 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 1239 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1180 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 1179 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1122 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 1121 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1062 Query 190 T 190 | Sbjct 1061 T 1061 >seq139244 Length=60618 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 40190 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 40249 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 40250 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 40307 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 40308 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 40367 Query 190 T 190 | Sbjct 40368 T 40368 >seq123401 Length=2673 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 916 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 857 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 856 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 799 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 798 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 739 Query 190 T 190 | Sbjct 738 T 738 >seq104126 Length=15269 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 2840 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2781 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 2780 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 2723 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 2722 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 2663 Query 190 T 190 | Sbjct 2662 T 2662 >seq10487 Length=3643 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 587 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 646 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 647 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 704 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 705 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 764 Query 190 T 190 | Sbjct 765 T 765 >seq45249 Length=21943 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 2245 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2304 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| | ||||||| Sbjct 2305 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCAGA-GTAATGA 2362 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 2363 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 2422 Query 190 T 190 | Sbjct 2423 T 2423 >seq27717 Length=10568 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 8210 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 8269 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || | | ||| || ||||||| Sbjct 8270 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGTCCTTCGGGATCGGA-GTAATGA 8327 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 8328 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8387 Query 190 T 190 | Sbjct 8388 T 8388 >seq32042 Length=240519 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| ||||| | | |||||| ||| Sbjct 104992 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTAGACATTAGCAT 105051 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| ||| | | ||| | ||||||| Sbjct 105052 GGGATAACATTATAGGATTT-CGGTCCTATTATGTTAGCCTTGGGGATTGGA-GTAATGA 105109 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| |||| |||| | ||||| || |||| |||||||||||||||||||| Sbjct 105110 TTAACAGGGACAGTCAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 105169 Query 190 T 190 | Sbjct 105170 T 105170 >seq18738 Length=25644 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||| | |||| |||| | |||||||| ||| Sbjct 582 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTACGCTCTGTATACATTAGCAT 641 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||| ||| Sbjct 642 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTATTGA 699 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||| ||||| ||| | ||||| || |||| |||||||||||||||||||| Sbjct 700 TTAATAAGGACAGTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 759 Query 190 T 190 | Sbjct 760 T 760 >seq159815 Length=56902 Score = 116 bits (128), Expect = 4e-24 Identities = 139/182 (76%), Gaps = 5/182 (3%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||| || | ||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 39400 CTGTTACTTTAAAGATATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 39459 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATG 128 | |||| | |||||| | |||||||||| || | | ||| || | || |||||| Sbjct 39460 GAGATAACATTATAGGATTT-CGGTTCTATTACGTTGTTCTTCGAG-ATCGAA-GTAATG 39516 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| ||||||||| | ||||| || ||||||||| |||||||||||||| Sbjct 39517 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAAAGGTAAAATTCTTGGATTT 39576 Query 189 AT 190 || Sbjct 39577 AT 39578 >seq78952 Length=2216 Score = 116 bits (128), Expect = 4e-24 Identities = 136/180 (76%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 1962 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 1903 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 1902 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1845 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| |||| |||| | ||||| || |||| |||||||||||||| ||||| Sbjct 1844 TTAACAGGGACAGTCTGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGTATTTA 1785 >seq124528 Length=31335 Score = 113 bits (124), Expect = 5e-23 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | | |||||| |||| |||| | |||||||| ||| Sbjct 29030 CTGTTACTTTGAAGAAATTAGAGTGCTTAAAGCAAGCCTACGCTCTGTATACATTAGCAT 28971 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATG 128 || |||| | |||||| | | || | ||| || || ||| || | | |||||| Sbjct 28970 GGGATAACATTATAGGATTT-CAGTCCAATTACGTTGGCCTTCGAGATCGGA--GTAATG 28914 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct 28913 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 28854 Query 189 AT 190 || Sbjct 28853 AT 28852 >seq65039 Length=10911 Score = 113 bits (124), Expect = 5e-23 Identities = 136/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 3765 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 3706 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | | || ||||| || || | ||| | ||||||| Sbjct 3705 GGGATAACATTATAGGATTT-CAGTCCTATTAGGTTGGCGTTCGGGATAGGA-GTAATGA 3648 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | | | ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 3647 TTAACAGGAACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 3588 Query 190 T 190 | Sbjct 3587 T 3587 >seq129544 Length=186279 Score = 111 bits (122), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||| ||||||||| | |||||||| |||| ||| | |||||| Sbjct 57841 CCAGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACAT 57782 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 || ||||| |||| | |||||| | ||| ||||| || || | ||| | | Sbjct 57781 TAGCATGGGATAACATTATAGGATTTT-GGTCCTATTACGTTGGCCTTCGGGATCAGA-G 57724 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| |||| |||| | ||||| || |||| |||||||||||||| Sbjct 57723 TAATGATTAACAAGGACAGTCAGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTG 57664 Query 184 GATTTAT 190 ||||||| Sbjct 57663 GATTTAT 57657 >seq5722 Length=281180 Score = 111 bits (122), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 ||| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 164318 ACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCA 164377 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||| |||| | |||||| | || | |||| || || | ||| | |||||| Sbjct 164378 TGGGATAACATTATAGGATTT-CGATCCTATAACGTTGGCCTTCGGGATAGGA-GTAATG 164435 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| ||||||||| | ||||| || |||| ||||||||||||| ||||| Sbjct 164436 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTTGATTT 164495 Query 189 AT 190 || Sbjct 164496 AT 164497 >seq2494 Length=14703 Score = 111 bits (122), Expect = 2e-22 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70 || |||||||||| ||||||||| | |||||||| |||| | | |||||||| |||| Sbjct 7599 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGTCTGTATACATTAGCATG 7540 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | |||| | |||||| | |||| ||||| || || | ||| || |||||||| Sbjct 7539 GGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGAT 7482 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| ||||||||| | |||| || |||| ||||||||||||||| ||||| Sbjct 7481 TAACAGGGACAGTCGGGGGAATTGATATTTCATAGTCAGAGGTGAAATTCTTGGTTTTAT 7422 >seq164480 Length=51814 Score = 109 bits (120), Expect = 6e-22 Identities = 135/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| || | |||||||| ||| Sbjct 32682 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGTATACATTAGCAT 32623 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | | | ||||| || || | ||| || ||||||| Sbjct 32622 GGGATAACATTATAGGATTTT-GATCCTATTACGTTGGCCTTCGGGATCGAA-GTAATGA 32565 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||||||||||||| | ||||| || |||| |||||||||||||||||| | Sbjct 32564 TTAACAAGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTGA 32505 Query 190 T 190 | Sbjct 32504 T 32504 Score = 102 bits (112), Expect = 8e-20 Identities = 133/180 (74%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATG 70 |||||||||||| ||||||||| | |||||||| |||| ||||| | ||||||| ||| Sbjct 629 TTTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTATATACATTTGCATA 570 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | |||| | |||||| | || | ||||| | || | |||| || |||||||| Sbjct 569 GGATAACATTATAGGA-TTTCGATCCTATTACATTGGCCTTCAGGATCG-GAGTAATGAT 512 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| |||||| || | ||||| | || | |||| |||||||||||||||| Sbjct 511 TAACATGGACAGTCGGCGGCATTCGTATTTCTTAGTTAGAGGTAAAATTCTTGGATTTAT 452 >seq67668 Length=9046 Score = 105 bits (116), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 ||| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 2196 ACTGTTACTTTGAAGAAATTAGAGTGATCAAAGCAAGCCTACGCTCTGTATACATTAGCA 2137 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||| |||| | |||||| | ||| |||| || || | ||| | |||||| Sbjct 2136 TGGGATAACATTATAGGATTT-CGGCCGTATTACGTTGGCCTTCGGGATTGGA-GTAATG 2079 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || | | ||| ||||||||| | ||||| || |||| |||| |||||||||||||| Sbjct 2078 ATTAGCAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTCAAATTCTTGGATTT 2019 Query 189 AT 190 || Sbjct 2018 AT 2017 >seq116782 Length=283846 Score = 104 bits (114), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||| Sbjct 226801 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAATCCTACGCTCTGTATACATTATCAT 226742 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || ||| | |||||| | |||| ||||| || | | | || || ||||||| Sbjct 226741 GGGATATCATTATAGGATTT-CGGTCCTATTACGTTGTCCTTCACGATCGGA-GTAATGA 226684 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| || ||||| ||| | ||||| || || | |||||||||||||||||||| Sbjct 226683 TTAATAGAGACAGTCGAGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTA 226624 Query 190 T 190 | Sbjct 226623 T 226623 >seq101266 Length=95454 Score = 104 bits (114), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||||| ||||||||| | ||||||| ||| ||| | |||||||| ||| Sbjct 86078 CTATTACTTTGAGGAAATTAGAGTGCTCAAAGCTATCCTGCACTCTGTATACATTAGCAT 86137 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || ||| | |||||| | |||| ||||| || || | ||| | ||||||| Sbjct 86138 GGGGTAACATTATAGGATTT-CGGTCCTATTACGTGGGCCTTCGGGATCAGA-GTAATGA 86195 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||||||||||||| | ||||| || |||| |||||||||||||| ||||| Sbjct 86196 TTAATAGGGATAGTCGGGGGCATTCGTATTTTATAGTCAGAGGTGAAATTCTTGTATTTA 86255 Query 190 T 190 | Sbjct 86256 T 86256 >seq165428 Length=51920 Score = 100 bits (110), Expect = 3e-19 Identities = 133/181 (73%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || || ||||||| ||||||||| | |||||||| |||| ||||| | ||||||| ||| Sbjct 38341 CTATTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTGGCAT 38400 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | | || ||||| | || | ||| | ||||| | Sbjct 38401 GGGATAACATTATAGGATTT-CAGTCCTATTAAATTGGCCTTCGGGATCAGA-GTAATTA 38458 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| ||| || | ||||||||||||| |||||| Sbjct 38459 TTAACAGGGACAGTCGGGGGCATTCGTATTTAATAGTAAGAGGTGAAATTCTTAGATTTA 38518 Query 190 T 190 | Sbjct 38519 T 38519 >seq113020 Length=33166 Score = 100 bits (110), Expect = 3e-19 Identities = 133/181 (73%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| |||||||| |||| ||| | |||||||| ||| Sbjct 31024 CTGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 30965 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| || || | ||| || ||||||| Sbjct 30964 GGGATAACATTATAGGATTT-CGATCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 30907 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||| | ||||| || |||| ||||||||||| |||||||| Sbjct 30906 TTAACAGGGACGATCGGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCATGGATTTA 30847 Query 190 T 190 | Sbjct 30846 T 30846 >seq104678 Length=256449 Score = 96.9 bits (106), Expect = 4e-18 Identities = 137/188 (73%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| | | |||||||||| ||||||||| | |||||||| |||| ||| | ||||| Sbjct 238598 CCAGCATTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTATGTATACAA 238657 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCC 122 || | ||| |||||| |||||| | |||| ||||| || ||| ||| || | Sbjct 238658 TAGCGTGGGATAATATTATAGGATTT-CGGTCCTATTAAGTTGGTCTTCGAGATTGGA-- 238714 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| |||| ||| | ||||| || |||| | ||||||||||| Sbjct 238715 GTAATGATTAACATGGACAGTCATGGGCATTCGTATTTCATAGTCACATGTGAAATTCTT 238774 Query 183 GGATTTAT 190 ||| ||| Sbjct 238775 AGATATAT 238782 >seq64579 Length=74326 Score = 96.9 bits (106), Expect = 4e-18 Identities = 133/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 34738 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 34797 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 | |||| | |||| | | |||| ||||| || || | ||| || ||||||| Sbjct 34798 GTGATAACATTATAGAATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGAA-GTAATGA 34855 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | |||||| |||| | |||| || |||| ||||||| |||||||||||| Sbjct 34856 TTAACAGAGATAGTGAGGGGCATTCGTATATCATAGTCAGAGGTGAA-TTCTTGGATTTA 34914 Query 190 T 190 | Sbjct 34915 T 34915 >seq33074 Length=20930 Score = 96.9 bits (106), Expect = 4e-18 Identities = 136/187 (73%), Gaps = 13/187 (7%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 ||| |||||||||| ||||||||| | |||||||| || | |||| | |||||||| | Sbjct 4434 ACTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCATACGCTCTGTATACATTAGTA 4375 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTC----TAGGACCGCCCG 123 ||| |||| | |||||| | | || ||||| ||| || ||| ||||| | Sbjct 4374 TGGGATAACATTATAGGATTT-CAGTCCTATTATGTTGGCCTTCGAGATAGGA------G 4322 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| | || |||| | ||||| || || | ||||||||||||| Sbjct 4321 TAATGATTAACAGGGACAATCAGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTT 4262 Query 184 GATTTAT 190 ||||||| Sbjct 4261 GATTTAT 4255 >seq101195 Length=28519 Score = 95.1 bits (104), Expect = 1e-17 Identities = 132/181 (73%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| ||| | |||||||| ||| Sbjct 8244 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 8303 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | | || ||||| | || | ||| | ||||||| Sbjct 8304 GGGATAACATTATAGGATTT-CAGTCCTATTACATTGGCCTTCGGGATCAGA-GTAATGA 8361 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| | | |||| | ||||| || |||| |||||||||||||||||||| Sbjct 8362 TTAACAGGGACAATATGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8421 Query 190 T 190 | Sbjct 8422 T 8422 >seq144163 Length=111769 Score = 89.7 bits (98), Expect = 5e-16 Identities = 129/178 (72%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| |||||||| | |||||||| |||| ||| | ||| |||| ||||| Sbjct 54434 TTACTTTGAAGTAATTAGAGTGCTCAAAGCAAGCCTACACTCTGTATATATTAGCATGGG 54493 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | |||| | | ||| ||||| ||| || | ||| ||| |||| | Sbjct 54494 ATAACATTATAGAATTTT-GGTCCTATTATGTTGGCCTTCGGGATTAGA-GTATTGATTA 54551 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 ||| ||| ||| |||| | ||||| ||| |||| |||||||||||||||||||| Sbjct 54552 ATAGGGACAGTTAGGGGCATTCGTATTTAATAGTCAGGGGTGAAATTCTTGGATTTAT 54609 >seq108387 Length=150095 Score = 77.0 bits (84), Expect = 3e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCAT 69 || |||||||||||| ||||||| | |||||||| | | |||| | |||||||| ||| Sbjct 48538 CTGTTACTTTGAAAATATTAGAGTGCTCAAAGCAATCATACGCTCTATATACATTATCAT 48597 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 | |||||| |||||| | ||| ||||| ||| || | ||| | | ||||||| Sbjct 48598 GCGATAATATTATAGGA-TTTAGGTCCTATTATGTTGGCCTTCGGGATC-CGAGTAATGA 48655 Query 130 TAAATACGGATAGTCGGGGGTGTCA 154 | || | || |||| ||||||||| Sbjct 48656 TTAACAGAGACAGTC-GGGGTGTCA 48679 >seq55538 Length=196835 Score = 73.4 bits (80), Expect = 4e-11 Identities = 94/127 (74%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 || ||||| |||| | |||||| | |||| ||||| || || | ||| || | Sbjct 43712 TAGCATGGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-G 43769 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| ||||||||| | ||||| || |||| |||||||||||||| Sbjct 43770 TAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 43829 Query 184 GATTTAT 190 ||||||| Sbjct 43830 GATTTAT 43836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511165494880