Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq108048 102 9e-20 seq159548 93.3 4e-17 seq124972 93.3 4e-17 seq89641 93.3 4e-17 seq10559 93.3 4e-17 seq145273 87.8 2e-15 seq66223 87.8 2e-15 seq90306 86.0 7e-15 seq126111 84.2 2e-14 seq75767 84.2 2e-14 seq68107 84.2 2e-14 seq41668 84.2 2e-14 seq139550 78.8 1e-12 seq74736 78.8 1e-12 seq71884 78.8 1e-12 seq99190 77.0 3e-12 seq99171 73.4 4e-11 seq86566 73.4 4e-11 seq3122 73.4 4e-11 >seq108048 Length=19205 Score = 102 bits (112), Expect = 9e-20 Identities = 89/110 (81%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 18254 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 18197 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| ||||| || |||||| ||| |||||||| |||||||||||| || Sbjct 18196 GAGGTCGCAGTGACCAGGTCCGGGCGACTGTTTACCAAAAACACAGGTCT 18147 >seq159548 Length=155745 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 107809 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 107866 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 107867 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 107916 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 134329 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 134272 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 134271 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 134222 >seq124972 Length=3829 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 2230 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 2287 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 2288 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 2337 >seq89641 Length=4526 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 2461 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 2404 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 |||| ||||| || | | |||||| |||||| | |||||||||||| || Sbjct 2403 GAGGTCGCAGTGACCAAGCCCAGGCGACTGTTCACCAAAAACACAGGTCT 2354 >seq10559 Length=115106 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 24699 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 24756 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 24757 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 24806 >seq145273 Length=1475 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| || ||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 866 TAAGGAACTCGGAAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 925 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 926 --GGTCGCAGTGACCAGGCCCTGGCGACTGTTTACCAAAAACACAGGTCT 973 >seq66223 Length=34553 Score = 87.8 bits (96), Expect = 2e-15 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | ||| || |||| ||| || |||| ||| ||||| Sbjct 15808 AAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGTGAGACAATTCTCTCTAAGG 15749 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 || | |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 15748 AAATCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGGT 15691 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| || ||| |||||||| |||||||| ||| || Sbjct 15690 CGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACATAGGTCT 15646 >seq90306 Length=6013 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 918 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 977 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 978 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 1017 >seq126111 Length=14710 Score = 84.2 bits (92), Expect = 2e-14 Identities = 90/118 (76%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 2163 TAAGGAACTCATCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGG 2222 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAAT 197 | | ||||| || ||| || ||| |||||||| |||||||||||| || || ||| Sbjct 2223 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAT 2278 >seq75767 Length=2634 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 1894 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 1951 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || |||| || ||| || || |||||||| |||||||||||| || Sbjct 1952 GGGGTTGCAGTGACCAGGCCCGGGTGACTGTTTACCAAAAACACAGGTCT 2001 >seq68107 Length=143758 Score = 84.2 bits (92), Expect = 2e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 30 GACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTA 89 |||||| ||| | || || ||||||| |||||||||| ||| || | |||||||| Sbjct 100841 GACACAGGTAAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTC 100900 Query 90 GGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 |||||| |||||| |||||||||||| || |||| Sbjct 100901 GGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 100934 >seq41668 Length=73201 Score = 84.2 bits (92), Expect = 2e-14 Identities = 90/117 (77%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||||||||||||||||| || ||| ||| | || ||| | Sbjct 24627 TAAGGAACTCGGCAAAATAACCCTGTAACTTCGGGAGAAGAGGTGCCTCCTCACAAA--G 24684 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || | ||| || ||| || ||| ||| ||| |||||||||||| || ||| || Sbjct 24685 GGGGTCTCAGTGACCAGG-CCCGGCGACTAATTACCAAAAACACAGGTCTATGCAAA 24740 >seq139550 Length=147644 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||| ||||| || ||| | ||| ||||||||||| || |||| ||| | || ||| || Sbjct 26586 TAAAGAACTCGGAAAAATAGCCCCATAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGG 26527 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| || |||||||||||| |||||||| ||| || Sbjct 26526 G--GTCGCAGTGACCAGGCCCGGGCAACTGTTTACCAAAAACAAAGGTCT 26479 >seq74736 Length=13389 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||||||| || || | ||| | || ||| | Sbjct 2400 TAAGGAACTCGGCAAAATAGCCCCATAACTTCGGGAGAAGGGATGCCTCCTCACAAA--G 2457 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || | | || ||| |||||||| |||||||||||| || Sbjct 2458 GGGGTCGCAGTGACCAAGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 2507 >seq71884 Length=144949 Score = 78.8 bits (86), Expect = 1e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 51 TATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAACTT 110 ||||||| |||||||||| ||| || | |||||||| |||||| |||||| ||||||| Sbjct 43607 TATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTT 43666 Query 111 CGGGATAAAGGGT 123 ||||| || |||| Sbjct 43667 CGGGAGAAGGGGT 43679 >seq99190 Length=79057 Score = 77.0 bits (84), Expect = 3e-12 Identities = 77/100 (77%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||| | || | || || ||||||| ||||||||| ||| | | ||| Sbjct 5346 CAAACCGACATAGGTGACCAAGTAGAGTATACTAGGGCGCTTGATAGAACAATGTCGAAG 5287 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| ||||||||||||||| |||| Sbjct 5286 GAACTCGGCAAAATGACCCCGTAACTTCGGGATAAGGGGT 5247 >seq99171 Length=33226 Score = 73.4 bits (80), Expect = 4e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| || ||||||| ||| || | ||| Sbjct 21682 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGAGCTTGAGAGAACCATGTCGAAG 21623 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| ||||| ||||||||||| || |||| Sbjct 21622 GAACTCGGCAAAAGGACCCCATAACTTCGGGAGAAGGGGT 21583 >seq86566 Length=7264 Score = 73.4 bits (80), Expect = 4e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| || |||||| ||| || | ||| Sbjct 1213 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGTACTTGAGAGAACCATGTGGAAG 1154 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| | |||| |||||||||||| || |||| Sbjct 1153 GAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGT 1114 >seq3122 Length=3305 Score = 73.4 bits (80), Expect = 4e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||| | || | || || ||||||| |||||||||| || || | |||| Sbjct 2297 CAAACCGACATAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGATCCATGTCTAAG 2356 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| || ||| ||||| |||||||||||| || |||| Sbjct 2357 GAACTTGGAAAAATGACCTCGTAACTTCGGGAGAAGGGGT 2396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530378965992