Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq90306 91.5 1e-16 seq73758 91.5 1e-16 seq159548 87.8 2e-15 seq145273 87.8 2e-15 seq124972 87.8 2e-15 seq10559 87.8 2e-15 seq86566 86.0 6e-15 seq74736 84.2 2e-14 seq126111 78.8 9e-13 seq119661 78.8 9e-13 seq102745 78.8 9e-13 seq90035 77.0 3e-12 seq71884 77.0 3e-12 seq71257 77.0 3e-12 seq89641 75.2 1e-11 seq99190 73.4 4e-11 seq81527 73.4 4e-11 seq72426 73.4 4e-11 seq51000 73.4 4e-11 >seq90306 Length=6013 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 1050 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 1109 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 1110 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 1144 >seq73758 Length=109932 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 89142 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 89201 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 89202 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 89236 >seq159548 Length=155745 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 107869 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 107928 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 107929 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 107974 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 134269 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 134210 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 134209 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 134164 >seq145273 Length=1475 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 926 GGTCGCAGTGACCAGGCCCTGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 985 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 986 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 1031 >seq124972 Length=3829 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 2290 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 2349 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 2350 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2395 >seq10559 Length=115106 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 24759 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 24818 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 24819 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 24864 >seq86566 Length=7264 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | |||||| |||||||||||||||| ||||||| || | || || Sbjct 1081 ATACCAGGGGGTAGCGACTATTTATTAAAAACACAGGACTCTGCTAAGTGGTAACATGAT 1022 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 1021 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 987 >seq74736 Length=13389 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||| ||| ||||||||||| |||||||||| ||| ||||| || Sbjct 2460 GGTCGCAGTGACCAAGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 2519 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 2520 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2565 >seq126111 Length=14710 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 2223 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAATTCGT 2282 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| | || ||||||| |||||||||||| || Sbjct 2283 AAGACTATGTATGGGGGCTAACACCTGCCCAGTGCCGGAAGGTCAA 2328 >seq119661 Length=76943 Score = 78.8 bits (86), Expect = 9e-13 Identities = 75/95 (79%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | | ||||||||||||||||||||| ||||||| || | || || Sbjct 47398 ATACCAGGG-GTAGTGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 47340 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| | |||||||||| ||||||| Sbjct 47339 GTATAGAGTTTGACACTTGCCCGGTGCTGGAAGGT 47305 >seq102745 Length=2661 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| || ||||| || Sbjct 311 GGTCGTAGTGACCAGGCCCGGGCGACTGTTTACAAAAAACACAGGTCTTCGCAAAGTCGT 252 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||| ||||||| |||||||||||| || Sbjct 251 AAGACCATGTATGGGGGATGACACCTGCCCAGTGCCGGAAGGTCAA 206 >seq90035 Length=33581 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | |||||||||||||||||| |||| ||||| | || | || || Sbjct 7349 ATACCAGGGGGTAGCGACTGTTTATTAAAAATACAGGACTCTACTAAGTGGTAACACGAT 7290 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| | |||||||||| ||||||| Sbjct 7289 GTATAGAGTTTGACACTTGCCCGGTGCTGGAAGGT 7255 >seq71884 Length=144949 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 || ||||| | |||||| |||||||||||||||| ||||||| || | || || Sbjct 43712 ATGCCAGGGGGTAGCGACTATTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 43771 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || ||| |||||||||||| ||||||| Sbjct 43772 GTATAGAGTCTGATACCTGCCCGGTGCTGGAAGGT 43806 >seq71257 Length=74622 Score = 77.0 bits (84), Expect = 3e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 73 TGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCT 132 |||||||||||||||||| ||||||| || | || || |||||| || |||| ||| Sbjct 53414 TGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCT 53355 Query 133 GCCCGGTGCCGGAAGGT 149 ||||||||| ||||||| Sbjct 53354 GCCCGGTGCTGGAAGGT 53338 >seq89641 Length=4526 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||| ||| ||||||||| | |||||||||| ||| ||||| || Sbjct 2401 GGTCGCAGTGACCAAGCCCAGGCGACTGTTCACCAAAAACACAGGTCTCCGCAAAGTCGT 2342 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | || | ||| |||||||||||| |||||||||||| || Sbjct 2341 AAGACCATGTTTGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2296 >seq99190 Length=79057 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 || ||||| | |||| |||||||||||||||||| ||||||| || | || || Sbjct 5214 ATTCCAGGGGGAAGCGATTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 5155 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || | || ||||||||||| ||||||| Sbjct 5154 GTATAGAGTCTCACACCTGCCCGGTGTTGGAAGGT 5120 >seq81527 Length=114860 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | | |||| |||||||||||||||| |||||| || | || || Sbjct 71400 ATACCAGGGGGTAGTGACTATTTATTAAAAACACAGGACTCTGGTAAGTGGTAACACGAT 71341 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || | || |||||||||||| ||||||| Sbjct 71340 GTATAGAGTCTAACACCTGCCCGGTGCTGGAAGGT 71306 >seq72426 Length=93734 Score = 73.4 bits (80), Expect = 4e-11 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 51 GAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGT 110 ||| |||||||| | ||||| |||||||||||||| || ||||||| || | || Sbjct 7308 GAACATACCAGGGGGTAGCGACGGTTTATTAAAAACATAGGACTCTGCTAAGTGGTAACA 7249 Query 111 GGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGG 148 || ||||| || |||| ||| |||||||| |||||| Sbjct 7248 CGAAGTATAAAGTCTGACACCTTCCCGGTGCTGGAAGG 7211 >seq51000 Length=189429 Score = 73.4 bits (80), Expect = 4e-11 Identities = 68/85 (80%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 43389 ATACCAGGG-GTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAATACGAT 43447 Query 115 GTATAGGGTGTGACGCCTGCCCGGT 139 |||||| || |||| |||||||||| Sbjct 43448 GTATAGAGTCTGACACCTGCCCGGT 43472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476063047788