Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq12208 78.8 6e-13 seq149394 75.2 7e-12 seq148249 75.2 7e-12 seq146454 75.2 7e-12 seq125104 75.2 7e-12 seq98742 75.2 7e-12 seq68279 75.2 7e-12 seq103199 71.6 8e-11 seq90954 71.6 8e-11 seq87622 71.6 8e-11 seq86986 71.6 8e-11 seq78191 71.6 8e-11 >seq12208 Length=818 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 191 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 248 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 249 TAAT-CAATGCGAG 261 >seq149394 Length=89147 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 84277 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 84334 Query 122 GCT 124 ||| Sbjct 84335 GCT 84337 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 87167 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 87110 Query 122 GCT 124 ||| Sbjct 87109 GCT 87107 >seq148249 Length=55278 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 33996 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 34053 Query 122 GCT 124 ||| Sbjct 34054 GCT 34056 >seq146454 Length=7857 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 2663 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 2606 Query 122 GCT 124 ||| Sbjct 2605 GCT 2603 >seq125104 Length=65414 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 44206 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 44149 Query 122 GCT 124 ||| Sbjct 44148 GCT 44146 >seq98742 Length=25302 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 9790 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 9733 Query 122 GCT 124 ||| Sbjct 9732 GCT 9730 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 11331 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 11274 Query 122 GCT 124 ||| Sbjct 11273 GCT 11271 >seq68279 Length=75834 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 2760 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 2817 Query 122 GCT 124 ||| Sbjct 2818 GCT 2820 >seq103199 Length=1037 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | || |||||||| |||||||||||||||||||||| | |||||| | Sbjct 905 TTCAATCGGTAGGA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 962 Query 122 GCT 124 ||| Sbjct 963 GCT 965 >seq90954 Length=9049 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||| |||||||||| | |||||| | Sbjct 5678 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGACAGGGACGTAGT-CAACGCGA 5735 Query 122 GCT 124 ||| Sbjct 5736 GCT 5738 >seq87622 Length=64865 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||| ||| | |||||| | Sbjct 48793 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGT-CAACGCGA 48736 Query 122 GCT 124 ||| Sbjct 48735 GCT 48733 >seq86986 Length=9466 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||| ||||||||||| | |||||| | Sbjct 8592 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACGTAGT-CAACGCGA 8649 Query 122 GCT 124 ||| Sbjct 8650 GCT 8652 >seq78191 Length=106491 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||||||||||| || | |||||| | Sbjct 55249 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACATAGT-CAACGCGA 55192 Query 122 GCT 124 ||| Sbjct 55191 GCT 55189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300350074640