Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq146454 107 3e-21 seq134727 107 3e-21 seq69974 107 3e-21 seq49867 107 3e-21 seq139114 102 1e-19 seq13557 100 5e-19 seq5979 98.7 2e-18 seq78090 93.3 7e-17 seq75709 93.3 7e-17 seq74756 93.3 7e-17 seq4857 93.3 7e-17 seq34283 91.5 2e-16 seq16024 91.5 2e-16 seq66455 89.7 8e-16 seq90954 86.0 1e-14 seq96010 84.2 4e-14 seq93080 80.6 4e-13 seq86986 80.6 4e-13 seq109264 77.0 5e-12 seq109775 75.2 2e-11 seq122719 73.4 6e-11 seq18401 73.4 6e-11 >seq146454 Length=7857 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 6457 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 6514 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 6515 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 6574 Query 121 GAA 123 ||| Sbjct 6575 GAA 6577 >seq134727 Length=69714 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 64394 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 64451 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 64452 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 64511 Query 121 GAA 123 ||| Sbjct 64512 GAA 64514 >seq69974 Length=15222 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 12188 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 12245 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 12246 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 12305 Query 121 GAA 123 ||| Sbjct 12306 GAA 12308 >seq49867 Length=159998 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 4541 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 4598 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 4599 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 4658 Query 121 GAA 123 ||| Sbjct 4659 GAA 4661 >seq139114 Length=7973 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| | | | || ||| || |||| Sbjct 4947 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTCATCGTGCTTGGTTGAAAAGCCAGT 5004 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||| ||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 5005 GGCGCGAATCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 5064 Query 121 GAA 123 ||| Sbjct 5065 GAA 5067 >seq13557 Length=141508 Score = 100 bits (110), Expect = 5e-19 Identities = 94/116 (81%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 41989 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 42046 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG-AATCCA 115 | |||||||||||| | ||||||||||| ||||||||||||||||||| |||||| Sbjct 42047 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGNAATCCA 42102 Score = 77.0 bits (84), Expect = 5e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || ||||| |||||||||||| | ||||||||| Sbjct 42106 AATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCACTGGATTAT 42165 Query 89 GGCTGAACGCCTCTAAGTCAGAATC 113 | ||||| ||||||||||||||||| Sbjct 42166 GACTGAATGCCTCTAAGTCAGAATC 42190 >seq5979 Length=5503 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 4974 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 4917 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | ||||||||| ||||| |||||||||||||||||| || | Sbjct 4916 GGCGCGAAGCTACCGTACGTTGGATTATGACTGAATGCCTCTAAGTCAGAATCCGGGCTA 4857 Query 121 GAA 123 ||| Sbjct 4856 GAA 4854 >seq78090 Length=30193 Score = 93.3 bits (102), Expect = 7e-17 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | || || ||| || |||| Sbjct 1241 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCACGCTTGGTTGAAAAGCCAGT 1298 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110 | |||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct 1299 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGA 1348 >seq75709 Length=116026 Score = 93.3 bits (102), Expect = 7e-17 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 58810 GTACGAGAGGAACCATTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 58753 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||||| | | ||||||||| ||||||||||||||||||||||| Sbjct 58752 GGCGCGAAGCTACCGTGCGATGGATTATGACTGAACGCCTCTAAGTCAGAATC 58700 >seq74756 Length=26150 Score = 93.3 bits (102), Expect = 7e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || ||| | | ||||||| | ||| || ||| | |||| Sbjct 21129 GTACGAGAGGAACCATTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAGGCCAGT 21072 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| || || ||||||||||||||||||| || | Sbjct 21071 GGCGCGAAGCTACCGTGCGCTGGATTATGACTCAATGCCTCTAAGTCAGAATCCAGGCTA 21012 Query 121 GAA 123 ||| Sbjct 21011 GAA 21009 >seq4857 Length=3680 Score = 93.3 bits (102), Expect = 7e-17 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||||||||| || ||| | | ||||| | | ||| || ||| || |||| Sbjct 3083 GTATGAGAGGAACCGTTGA-TTC-GCACAATTGATCATCGCGCTTGGTTGAAAAGCCAGT 3026 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| ||||| |||||||||||| |||||| || | Sbjct 3025 GGCGCGAAGCTACCGTGTGCTGGATTATAACTGAATGCCTCTAAGTCAAAATCCAGGCTA 2966 Query 121 GAA 123 ||| Sbjct 2965 GAA 2963 >seq34283 Length=238 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || ||||| |||||||||||| | |||| |||||| Sbjct 228 AATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTAGATTAT 169 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 | |||||||||||||||||||||||| || |||| Sbjct 168 GACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAA 134 >seq16024 Length=122575 Score = 91.5 bits (100), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || |||| ||||||||||| | ||||||||||| Sbjct 109694 AATTGGTCATCGCGCTTGGTTGAAAAGCTAGTGGAGCGAAGCTACCGTGTGCTGGATTAT 109635 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 | ||||||||||||||||||||||||| || |||| Sbjct 109634 GACTGAACGCCTCTAAGTCAGAATCCAGGCTAGAA 109600 >seq66455 Length=50999 Score = 89.7 bits (98), Expect = 8e-16 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || | | |||| |||| ||||| || ||| | |||| Sbjct 43912 GTACCAGAGGAACCGTTGACTC--GCATAACTGGTCATTGCGCTTGGTTGAAAATCCAGT 43969 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||| ||||||| ||||||||| || | Sbjct 43970 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACTCCTCTAAATCAGAATCCGGGCTA 44029 Query 121 GAA 123 ||| Sbjct 44030 GAA 44032 >seq90954 Length=9049 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| ||||||||| || |||| | || ||||| | | | || ||| || |||| Sbjct 1755 GTACAAGAGGAACCATTGA-TTCACA-TAGTTGGTCATCGTGCTTGGTTGAAAAGCCAGT 1698 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||| | |||||||| || |||||||||||||||||||||||| Sbjct 1697 GGCGCGAAGCTACCGTGCGCTGGATTCTGACTGAACGCCTCTAAGTCAGAATCC 1644 >seq96010 Length=42370 Score = 84.2 bits (92), Expect = 4e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 || |||||||||| || ||| | | ||||||| | ||| || ||| || ||||| Sbjct 16022 TATGAGAGGAACCATTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTG 15965 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||| ||||| | ||||||||||| |||| ||||||||||||||||||| Sbjct 15964 GCGCGAACCTACCGTGCGCTGGATTATGACTGAGCGCCTCTAAGTCAGAATCC 15912 >seq93080 Length=39258 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || ||| | | ||| |||| | ||| | ||| || ||| Sbjct 11142 GTACAAGAGGAACCGTTGA-TTC-GCACAATGGGTTATCGCGCTTAGTTGAAAAGCTAGT 11199 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||| |||| | ||||||||||| ||||| |||||||||||||||||| || | Sbjct 11200 GGTGCGAAGTTACCGTGCGCTGGATTATGACTGAATGCCTCTAAGTCAGAATCCGGGCAA 11259 Query 121 GAA 123 ||| Sbjct 11260 GAA 11262 >seq86986 Length=9466 Score = 80.6 bits (88), Expect = 4e-13 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||| | | ||| || ||| || |||| Sbjct 2809 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGATCATCGCGCTTGGTTGAAAAGCCAGT 2752 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | |||||||||| ||||| | |||||| ||| |||| | || | Sbjct 2751 GGCGCGAAGCTACCGTGCGCTGGATTATAACTGAATGGCTCTAACTCAAAATCTAGGCTA 2692 Query 121 GAA 123 ||| Sbjct 2691 GAA 2689 >seq109264 Length=80746 Score = 77.0 bits (84), Expect = 5e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || ||||| ||||||||||||| |||||||||| Sbjct 23066 AATTGGTCATCGCGTTTGGTTGAAAAGCCAGTGGAGCGAAGCTACCATGCGCTGGATTAT 23007 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 | || || |||||||||||||||| | || |||| Sbjct 23006 GACTAAATGCCTCTAAGTCAGAATTCGGGCTAGAA 22972 >seq109775 Length=37761 Score = 75.2 bits (82), Expect = 2e-11 Identities = 86/113 (76%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||| ||||| || ||| | | ||||||| | ||| || ||| || ||| Sbjct 19347 GTAAGAGAGAAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCTAGT 19404 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | | ||||||||||| ||||||||||| |||| ||||||||||||||||| Sbjct 19405 GGTGTGAAGCTACCATGCGCTGGATTATGAGTGAATGCCTCTAAGTCAGAATC 19457 >seq122719 Length=30187 Score = 73.4 bits (80), Expect = 6e-11 Identities = 73/95 (77%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || ||||| || |||||||| | ||| ||||| Sbjct 755 AATTGGTCATCGCGCTTGATTGAAAAGCCAGTGGCGTGAAGCTACTGTGCGCTAGATTAC 814 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 | |||||||||||||||||||||||| || |||| Sbjct 815 GACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAA 849 >seq18401 Length=252817 Score = 73.4 bits (80), Expect = 6e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 74697 AGCCAGTGGGGCAAAGCTACCATGCTCTGGATTATGACTGAACGCCTCTAAGTCAGAATC 74756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817933827072