Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq75959 174 1e-38 >seq75959 Length=145061 Score = 174 bits (192), Expect = 1e-38 Identities = 377/561 (67%), Gaps = 5/561 (1%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||||| || ||| || |||||||| | ||||| |||||||| Sbjct 63887 ATTTGGGAAATGTACAAAAAAGCCTTAGCCTCTTTCTGGACTGCTGAGGAAGTCGATTTA 63828 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 || ||| | | ||||||| || | ||| ||| |||||||| | ||| Sbjct 63827 TCTTCAGATACCCGTCACTGGGAAACCCTAACCCCCGGCGAAAGGCATTTCATCACTCAT 63768 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || | || || || ||||| || ||||| ||||| || || || | | | ||| Sbjct 63767 GTCCTTGCCTTTTTCGCCGCCTCAGACGGCATCGTTTTAGAAAACCTAGCCGGAAGGTTC 63708 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | | || || ||||| ||||||||||| ||||||||||||||| || || || || Sbjct 63707 ATGAAAGAAGTCCAAGTTGCGGAGGCGCGTGCTTTCTACGGCTTCCAAATCGCGATTGAA 63648 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG-CGGGCGGA 61385 || |||| || |||||||||||| | || | || | ||||||| ||| | | || | Sbjct 63647 AACATCCATTCCGAGATGTACAGTCTGCTTCTAGAGTCTTACATCAAGGACTCTGACGAA 63588 Query 61386 ACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTG 61445 | | | |||| ||| || | ||||| || || || || ||| ||| | || Sbjct 63587 AAAAGCA-GATTATTCCGCGCAGTTGAGACTATCCCCTGTGTTGAGAAGAAGGCGAAGTG 63529 Query 61446 GGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGC 61505 ||| | ||||||| | || | | ||||||| || || ||| | |||||||| Sbjct 63528 GGCACTACGTTGGATCGACGGTTCC---GAAACATTTGCGGAGCGTTTGGTTGCATTTGC 63472 Query 61506 GGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACG 61565 || || ||| | |||||| |||| || || || || ||||| || || || Sbjct 63471 TTGTGTGGAAGGTATTTTTTTCTCTGGAAGCTTCTGTGCTATATTCTGGTTAAAAAAGCG 63412 Query 61566 TGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 || | ||||| || | |||||| || |||||||| ||| | ||||| || |||| Sbjct 63411 GGGGTTAATGCCTGGATTAACCTTCTCGAACGAGTTGATTTCAAGGGACGAAGGTTTGCA 63352 Query 61626 TTGTGATTTTGCTGTTTTGCT 61646 |||||||||||| |||||| Sbjct 63351 CTGTGATTTTGCTTGTTTGCT 63331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396794932502720