Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 226 1e-56 >seq6 Length=8288 Score = 226 bits (250), Expect = 1e-56 Identities = 225/285 (79%), Gaps = 10/285 (4%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC 462 || ||||||||| ||||||||||||||||||| |||| | ||||||| ||| || Sbjct 3396 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACAGGTTAGT- 3338 Query 463 AAACCCGT-GCGCGTAATGAAAGTGAACGGAGGTGGGAAC--CCGTG-AGGGTGCACCAT 518 ||||| || || || ||| ||| ||||||| | || || |||||||||| Sbjct 3337 AAACCTGTAAGGCACAAGGAAGCTGA---TTGGTGGGATCCTCCTTGTGGGGTGCACCAC 3281 Query 519 CGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578 ||||||| | |||| | || || || || |||| ||||||| |||| ||||||||||| Sbjct 3280 CGACCGACCTTGATCTTTTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAA 3221 Query 579 GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGC 638 ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| Sbjct 3220 GATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGCAGC 3161 Query 639 GGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 3160 GATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 3116 Score = 167 bits (184), Expect = 1e-38 Identities = 136/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||| |||||||||||||||||| | || ||| ||| |||||| || || || Sbjct 3782 TCGACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATAGGGCGGTGAATTTCGTCCAAGGC 3723 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| ||| ||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 3722 TAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 3663 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 3662 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079950643550