Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq2 320 5e-85 >seq2 Length=25627 Score = 320 bits (354), Expect = 5e-85 Identities = 278/343 (81%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| || || |||||||||||||| |||||||||| | Sbjct 9725 CGCGTCTGATTAGCTAGTTGGTGGGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 9666 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 9665 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 9606 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 9605 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 9546 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 ||||| |||||| | || ||| | | | ||||| |||||||||| || ||| Sbjct 9545 AGGCCCACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 9486 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 9485 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 9426 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || ||||||| Sbjct 9425 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 9384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497565540224