Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq101 196 2e-47 seq2 185 3e-44 >seq101 Length=1271 Score = 196 bits (216), Expect = 2e-47 Identities = 325/459 (71%), Gaps = 24/459 (5%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 245 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 304 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 305 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 364 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 365 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 422 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGG-GGTCATTGCGACTTACCAAACCA 269 | || | | ||||||||||| |||||||| || |||| || |||||||| || Sbjct 423 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCATTTCGCCTTACCAACCCC 482 Query 270 TTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCT 323 | ||||||||||| | || ||| || ||| | || | | |||||||| Sbjct 483 AGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTA----TTGGGTGCT 538 Query 324 AAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGC 383 ||| ||| ||||||| || | || || | ||||||| ||| || | | Sbjct 539 AAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCAC 598 Query 384 TAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAG 441 | ||| || || |||| |||| || | |||| | |||| || ||||||||||||| Sbjct 599 TTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAG 654 Query 442 CCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||| || ||| |||| |||||| |||||||| ||| || Sbjct 655 CCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 692 >seq2 Length=25627 Score = 185 bits (204), Expect = 3e-44 Identities = 394/582 (68%), Gaps = 36/582 (6%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 5283 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 5224 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 5223 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 5164 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 5163 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 5104 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 5103 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 5049 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 5048 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 4991 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 4990 CCTCAAAATAACAGGGGTCAAGGTCAGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 4931 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 4930 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 4873 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 4872 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 4814 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 4813 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 4755 Query 517 CTACCGAAGCAGTGGGATCATTTATATGATCGGTAGGGGAGC 558 || ||||||| ||||||| | | |||||||||||||| Sbjct 4754 CTGCCGAAGCTGTGGGATGTAAAAAAACATCGGTAGGGGAGC 4713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689561122304