Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq6 677 0.0 >seq6 Length=8288 Score = 677 bits (750), Expect = 0.0 Identities = 473/533 (89%), Gaps = 5/533 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1334 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 1393 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1394 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATT 1453 Query 127 GGCCCGC-GAAGGA--CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| || ||| | |||| ||| ||| || | || || |||| |||| Sbjct 1454 GGCCTGCCGAAACAAACCTTGGGTCCAAAAAGAGGGGCAT-AACCCCGCCTCCGATTCAC 1512 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC-TCCCA 242 || ||||||||| |||| ||| |||||||||||||| ||||| || | || ||||| Sbjct 1513 GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCAATTGCGACGTTTCCGCCTCCCA 1572 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1573 CTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 1632 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 1633 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 1692 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1693 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 1752 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1753 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 1812 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1813 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635162374048