Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2 192 2e-46 >seq2 Length=25627 Score = 192 bits (212), Expect = 2e-46 Identities = 392/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 3547 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 3606 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 3607 GTCCGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 3665 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || || || |||||||||| || Sbjct 3666 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTC 3725 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || || | |||| | Sbjct 3726 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAG-GAGGCCT--T 3782 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | || ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 3783 CTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 3840 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 3841 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 3900 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 3901 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 3959 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 3960 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 4019 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 4020 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 4073 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 4074 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 4103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702360827776