Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq7 455 4e-123 seq476 264 1e-65 seq544 174 2e-38 >seq7 Length=7073 Score = 455 bits (504), Expect = 4e-123 Identities = 602/831 (72%), Gaps = 8/831 (1%) Strand=Plus/Minus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || || || ||||| || ||||| || || | || ||||| ||| ||| | || Sbjct 827 GACCGTTTCGTTTTTGTAGGCTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 768 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| | || |||||||| ||||| || ||||| ||||| || | || Sbjct 767 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCGTGGTATACCCATGGATTGGC- 709 Query 164037 TCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 ||||| | ||| ||| ||| |||||| | || || || || || || |||||| | Sbjct 708 --TAGTTCCTATTTGGAAGGCTGC-AATTTCTTAACTGCCGCAGTTTCTACTCCTGCTAA 652 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | |||||| | | ||||| ||||||||||| | ||||| || || | | | Sbjct 651 TAGTTTAGCGCATTCTTTATTGCTACTATGGGGTCCTGAAGCACAGGGAGATTTTACTCG 592 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212 ||||| ||| | || || || ||| ||||||| || ||||| || |||||| || || Sbjct 591 TTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTTTCCATGGCGCTTTCGGACTAAT 532 Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272 ||||||||||| || || || ||| |||| || ||| | || || || ||||| Sbjct 531 AGGTTTCATGCTACGTCAATTCGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 472 Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332 || || ||||||| ||| |||||||| ||||| || ||||| || || || || || Sbjct 471 AATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGG 412 Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392 || ||| ||||||||||||| || ||||| || || || || || ||||| || | Sbjct 411 TCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGCGTAGCAGCTATATTTCGATTCATCCT 352 Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452 || | ||||| || ||||| ||||| | ||||| || ||||||||||| ||||| || Sbjct 351 CTTTTTTCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 292 Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512 | | || | |||| | || || ||||||||||||||||||||||| |||||||| || Sbjct 291 TGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATT 232 Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572 |||||||||||| ||||||| ||| || || | || ||||||| |||||| || Sbjct 231 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCGGAAGAAAC 172 Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632 ||| || |||||||| || |||||||| ||||| || |||||||| ||||||| ||| Sbjct 171 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATTTTTGGGGTTGCTTTTTCCAA 112 Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692 ||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 111 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGC 52 Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTC 164743 | |||| | ||||||| || || || || || || ||||| ||||| || Sbjct 51 TCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGCGCCTATGACTTTGTTTC 1 >seq476 Length=815 Score = 264 bits (292), Expect = 1e-65 Identities = 326/439 (74%), Gaps = 5/439 (1%) Strand=Plus/Minus Query 160572 TTCTGCGAGTGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTG 160631 ||||| | ||| ||||| || | || ||||||||| | || ||||| ||||| | Sbjct 442 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTA 383 Query 160632 ATGATCCCAACTCTGTTGGCAGCAACCGTCTGC-TTTATTACTGCGTTCGTTGCTGCTCC 160690 |||||||| || | ||| | ||||| |||| ||||||| || ||| |||||||||| Sbjct 382 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 324 Query 160691 CCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAA 160750 || || || || || ||||| |||||||| ||| |||| || || | ||||||||||| Sbjct 323 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 264 Query 160751 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCAT 160810 ||| || || ||||| || ||||| |||| || || ||| | ||||| ||||| || Sbjct 263 CATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 204 Query 160811 TTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGT 160870 |||||||| ||||| ||||||||||| | ||||||||||||||||| |||| | || Sbjct 203 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 144 Query 160871 ATTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCG 160930 | |||||| | | || | || ||||||||||| |||||||| | || | ||| Sbjct 143 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGC-TTAGTTCCG 85 Query 160931 CCTCGGCATGCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTG 160989 || || ||||| || ||||| ||| ||||||||||| || || ||||| ||||| | || Sbjct 84 TCTAGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCCGTTGCAGCTGCTACTG 26 Query 160990 CAGTATTCCTCGTCTATCC 161008 | || ||| | |||| || Sbjct 25 CTGTTTTCTTGATCTACCC 7 >seq544 Length=768 Score = 174 bits (192), Expect = 2e-38 Identities = 178/231 (77%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 161328 CGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTT 161387 |||||||| ||||||||||| || || |||||||| || ||||||||||||||||| | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 161388 GGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGTCCATCATGGAT 161447 ||| | ||| ||||| |||||||| || || ||||| |||||||| ||| | | ||| Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 161448 GGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATG 161507 |||| || || | || || |||||||| || | ||||| ||||||| |||| Sbjct 121 AGTCAAGGACGTGTAATTAATACTTGGGCTGA-TATCATTACCGTGCGAACCTTGATATG 179 Query 161508 GAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTGCT 161558 ||||| ||||| || ||||||||||| | ||| ||||| || || |||||| Sbjct 180 GAAGTTATGCATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGCTGCT 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559311912328400