Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02]
121,993 sequences; 332,616,730 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq50997 73.4 8e-11
>seq50997
Length=3988
Score = 73.4 bits (80), Expect = 8e-11
Identities = 168/248 (68%), Gaps = 5/248 (2%)
Strand=Plus/Plus
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| | |||||| ||| | |||||||| |||| | | | | || || |||||||||
Sbjct 3315 TGACCGTGTGCCTGTTGAAGAATGAGCCGACGACTCA-TAGGCAATGGCTTGGTTAAGGG 3373
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| |||| || |||||||| ||| | ||||| | || || | |
Sbjct 3374 AACCCA--CCGG-AGCCATAGCAAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCCTAT 3429
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| |||||| |||| ||||| ||| | | ||||
Sbjct 3430 GGACTCGAACCTGGGTGATCTATCCACGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 3489
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| |||||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 3490 GGTCCGAACCGACTGATGTTGAAGAATCAACGGATGAGTTGTGGTTAGGGGTGAAATGCC 3549
Query 312 AATCAAAC 319
| || |||
Sbjct 3550 ACTCGAAC 3557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 971613252096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |