Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq19 401 9e-110
seq163806 147 3e-33
seq151804 95.1 2e-17
>seq19
Length=8689
Score = 401 bits (444), Expect = 9e-110
Identities = 245/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 4578 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 4635
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4636 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 4695
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4696 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 4755
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 4756 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTGGAAG 4815
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 4816 GCCATAGTCCCTCTAA 4831
>seq163806
Length=1398
Score = 147 bits (162), Expect = 3e-33
Identities = 155/200 (78%), Gaps = 13/200 (7%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCG--AGCTTGATGACTCGCGCTTACTAGGAATT 58
|||||||| |||| | |||||||||| | |||| | |||||| |||||| || ||||
Sbjct 504 GTACAAAGAACAGGAAGGTAGTCAACGTGTGAGCT-GTTGACTCACGCTTATTAAAAATT 562
Query 59 TCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA--G 116
| | |||| | ||||| ||||| |||||||||||||| ||| ||||| |||| ||| |
Sbjct 563 -CTTTGTTGCAAACCAATAATTGTAATGATCTATCCCCGTCATGATGAGATTTTAAAAAG 621
Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|||| || ||| |||||| |||||| || ||| ||||||| ||||| || |
Sbjct 622 ATTATTTGGGCCTATCGGCC-------TAGACTTGTAGAAGACATCAGCATAGCGAGCAT 674
Query 177 GCGGCCCAGAACATCTAAGG 196
||||||||||||||||||||
Sbjct 675 GCGGCCCAGAACATCTAAGG 694
>seq151804
Length=904
Score = 95.1 bits (104), Expect = 2e-17
Identities = 119/161 (74%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||| |||| ||| | |||||| | || |||| ||||||||| | ||||| |
Sbjct 277 GTACAAGAGGCAAGGATATCGTCAACAAAAACTA-ATGATTCGCGCTTATGATGAATTGC 335
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||| | |||||||||||| || ||| || | | ||||| || |||||||||||||||
Sbjct 336 -TCGATAAAGACCAACAATAAAAAAGATTTACCTCTATCACAATAAAATTTCAAAGATTA 394
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT 161
| ||| |||||||| | ||||||| |||| |||||
Sbjct 395 TTCAAGCCTATCGGCCAAAATCATAGACTAATTGAGTACAT 435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750295222580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |