Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq16 224 3e-56
seq1302 172 1e-40
>seq16
Length=45662
Score = 224 bits (248), Expect = 3e-56
Identities = 293/402 (73%), Gaps = 4/402 (1%)
Strand=Plus/Minus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
||||||||| ||||||||| ||||||||||||||||||| || ||| |||||||||||
Sbjct 31791 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 31732
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
|||||| | |||||||||||||| | ||| || | | |||| | || |||||||
Sbjct 31731 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCACCGTAAAATCCC 31672
Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTG-CACGACTAGAGTGTGTCAGAGGGGGGT 189
||||| |||| ||| || | | |||| || | || |||| | || || |
Sbjct 31671 AGGGCTCAACCCTGGACAAGCGGTGGAAACTGTCAAG-CTGGAGTACGGTAGGGGCAGAG 31613
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||
Sbjct 31612 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGC 31553
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| | ||||| |||||||| || | |||||||| ||||||| || ||||||||
Sbjct 31552 ACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGA 31493
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG- 368
|||| ||||||| ||| |||||||| ||| | ||||| | | | || ||
Sbjct 31492 GACCCCAGTAGTCCTAGCCGTAAACGATGGATACTGGGTGTTGTGCGTATCGACCCGTGC 31433
Query 369 -GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| ||||||||||||| |||| ||||||||||| |||
Sbjct 31432 AGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 31391
>seq1302
Length=14205
Score = 172 bits (190), Expect = 1e-40
Identities = 227/310 (73%), Gaps = 10/310 (3%)
Strand=Plus/Minus
Query 32 GTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAA 91
||||||||||||||||||| ||| ||| ||||| ||| ||||||| ||||||||||||
Sbjct 14205 GTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAA 14146
Query 92 GCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAA-TCCCCG--GGCTTAACCTGG-GAA 147
| | || ||||||| | | ||| ||||| || | | | || |||| | |
Sbjct 14145 GGGCACGTAGGCGGTG-----AATCGGGT-TGAAAGTCAAAGTCGCCAAAAACTGGCGGA 14092
Query 148 TTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCA 207
||| | | || ||| ||||| | |||||| | |||||||| | ||||||
Sbjct 14091 ATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGG 14032
Query 208 GTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACAC 267
||||||| |||| || | | |||||| |||| ||||||||||| | ||||| ||
Sbjct 14031 GTGAAATCCGTAAATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTAC 13972
Query 268 TGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 327
|||||| | ||||||| |||||||| ||| ||||||||||||||||||||||| ||
Sbjct 13971 CGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCATGC 13912
Query 328 CCTAAACGAT 337
| ||||||||
Sbjct 13911 CGTAAACGAT 13902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1286582181248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |