Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq258 331 2e-88
seq802 273 5e-71
seq177135 84.2 5e-14
>seq258
Length=11790
Score = 331 bits (366), Expect = 2e-88
Identities = 291/360 (81%), Gaps = 17/360 (5%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 6773 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 6832
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 6833 ACGCCTTTCGTGCAGGTCGGAACTTACCCGACAATGAATTTCGCTACCTTAGGACCGTTA 6892
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC- 185
||||||||||||||||| || ||||||| || | ||| | | | | ||||||
Sbjct 6893 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCTCTGTC---ATCAGATCA 6949
Query 186 ------CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239
|||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||
Sbjct 6950 CCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGAC 7009
Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----- 294
|| || || ||||||||||||||||||||||||| |||||| || ||||| ||
Sbjct 7010 TTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTT 7069
Query 295 TGTCAT-AGA-CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||| || || |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 7070 TGTGATGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 7129
>seq802
Length=17821
Score = 273 bits (302), Expect = 5e-71
Identities = 286/376 (76%), Gaps = 20/376 (5%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 11586 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 11645
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 11646 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 11705
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| ||||||| |||| |||| | |||
Sbjct 11706 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTAG--------AAC 11757
Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || |||| |||||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 11758 ACTTCTCCTTTCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 11817
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 11818 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 11877
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 11878 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 11937
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 11938 CTTCGACATGGTTCTC 11953
>seq177135
Length=219
Score = 84.2 bits (92), Expect = 5e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 81 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCC 140
|||||||||||||| ||||| ||||||| | |||||||||| ||||||||||||| ||
Sbjct 218 GGTCGGAACTTACCTGACAATGAATTTCACAACCTTAGGACTATTATAGTTACGGCTTCC 159
Query 141 GTTTACTGGGGCTT 154
||| | |||||||
Sbjct 158 GTTCATCGGGGCTT 145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1059913856512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |