Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq16 230 5e-58
seq79403 75.2 2e-11
seq22 73.4 8e-11
>seq16
Length=45662
Score = 230 bits (254), Expect = 5e-58
Identities = 258/337 (77%), Gaps = 21/337 (6%)
Strand=Plus/Plus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
|| || | ||| || |||||| | | |||||||||||| || |||||||||||||||
Sbjct 31830 TTCACGACCCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 31887
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| || ||||| |||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 31888 TTGCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 31947
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||||||||||
Sbjct 31948 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCAC 32007
Query 182 CAACTAGCTAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240
||||||||||||| ||| | || | | || || ||| || ||| |||
Sbjct 32008 CAACTAGCTAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTT 32054
Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA- 299
| | | | | | || | ||||||||| |||||||| |||| | ||| || |||
Sbjct 32055 TTACTCCTCAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCCGTTGTTCCC--CTCCCAA 32111
Query 300 -GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335
||||| ||| || || |||||||||||| |||| ||
Sbjct 32112 GGGCAGGTTCTTACGCCTTACTCACCCGTTCGCCACT 32148
>seq79403
Length=3773
Score = 75.2 bits (82), Expect = 2e-11
Identities = 81/106 (76%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCC-AGTGTGACTGATCATCCTCTCAGACCAGT 147
|| |||||||||| ||||||| | | || ||||||| |||| ||||||| ||| |
Sbjct 1345 CCATAGGAGTCTGAGTCGTGTCTTAATCCCCAGTGTGATTGATAATCCTCTTAGATCGTC 1286
Query 148 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
||| ||| ||| || || || ||||||||||||||||| ||||
Sbjct 1285 TACTGATTATCGTATTAGTAAGTTATTACCTCACCAACTAGTTAAT 1240
>seq22
Length=8438
Score = 73.4 bits (80), Expect = 8e-11
Identities = 65/80 (81%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 12 GAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATA 71
||||| ||| |||| |||||| |||| ||||||| |||||||| ||| ||||| |
Sbjct 1122 GAAGAACTTTCTTCATTCACGCGAGATTG-CTGGATCGGGCTTTCGAAGATTCTCCAAGA 1064
Query 72 TTCCCCACTGCTGCCTCCCG 91
||||||||||||||| ||||
Sbjct 1063 TTCCCCACTGCTGCCCCCCG 1044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1069491391360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |