Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq258 255 2e-65
seq802 141 3e-31
seq169992 98.7 4e-18
>seq258
Length=11790
Score = 255 bits (282), Expect = 2e-65
Identities = 341/470 (73%), Gaps = 28/470 (6%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 7989 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 8048
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||| | ||
Sbjct 8049 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCGCTTAGT 8108
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 8109 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 8168
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 8169 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 8221
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| |||||||| |||
Sbjct 8222 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTC------- 8272
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
| || | | | |||| || | ||| || | ||||||| || |||||||||
Sbjct 8273 -----AGAGCCCCGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 8327
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| |
Sbjct 8328 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 8387
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 8388 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 8437
>seq802
Length=17821
Score = 141 bits (156), Expect = 3e-31
Identities = 165/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146
||||| |||||| |||| ||||||||||||| || | ||| ||||| || |
Sbjct 13115 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 13174
Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206
||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| ||||
Sbjct 13175 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 13234
Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265
| ||||||||| | ||| | || || ||||||||||||||||| | | ||| | |
Sbjct 13235 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 13294
Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
||||||||||| ||||| |||||| | | ||||||||
Sbjct 13295 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 13334
Score = 109 bits (120), Expect = 2e-21
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACT--ATTTCACTCCCCGCCAGGGGTAC 505
|| |||| |||||| ||| | | |||||| || ||| ||||||| |||| |
Sbjct 13501 CTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTC 13560
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||
Sbjct 13561 TTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTA 13620
Query 566 ACGGGTGGTCCC 577
||||||||||
Sbjct 13621 GAGGGTGGTCCC 13632
>seq169992
Length=351
Score = 98.7 bits (108), Expect = 4e-18
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
|||| ||| || ||||||| |||||||||||||| | | | ||| || || | ||||||
Sbjct 307 GCTGTGCCTCAACGCATTTCAGGGAGAACCAGCTAGCTCTAGGTTCGAGTGACATTTCAC 248
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| || | |||| | | | | |||||| | | | ||||||| ||| | ||
Sbjct 247 CCCTAATCATAACTCATTCACCGATTCTTCAACATCACTCGGTTCGGAGCTCTGCTTAGT 188
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
| |||| |||||| |||| ||||||||||||| | | ||||||||
Sbjct 187 TTCACCCAAGCTTCATCCTGGTTATGGATAGATCACCTAGGTTCGGGTC 139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1813346597888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |