Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq258 127 2e-27
seq1302 123 2e-26
seq28 87.8 1e-15
>seq258
Length=11790
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| |||| | ||| |||| ||||||| |||||||||
Sbjct 11455 CGAGTTGCAGCCTGCAATCCGAACTAAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 11514
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||| ||| |||| |||||||| |||
Sbjct 11515 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGCGTGTCGCCCAGGGCATAAGGGGCAT 11574
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 11575 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 11614
>seq1302
Length=14205
Score = 123 bits (136), Expect = 2e-26
Identities = 124/160 (78%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 13059 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 13117
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 13118 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 13177
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 13178 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 13217
>seq28
Length=37419
Score = 87.8 bits (96), Expect = 1e-15
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 73 TCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGAC 132
|||||| | |||||||| ||||||| |||| ||||||||||||||| |||||||||
Sbjct 3513 TCTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGAC 3454
Query 133 GTCATCCCCACCT 145
|||||||||||||
Sbjct 3453 GTCATCCCCACCT 3441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415056931640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |