Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq16 262 9e-68 seq1302 181 3e-43 >seq16 Length=45662 Score = 262 bits (290), Expect = 9e-68 Identities = 298/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 31787 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 31728 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || ||||||| || ||| | | || Sbjct 31727 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCACCGTAAAATCCCAGGG 31668 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | ||||||| ||| |||| | | ||||||| ||||| Sbjct 31667 CTCAACCCTGGACAAGCGGTGGAAACTGTCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 31608 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 31607 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 31548 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || |||||||| |||| Sbjct 31547 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAGACCC 31488 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| ||||| ||||| | ||| || | | | ||| Sbjct 31487 CAGTAGTCCTAGCCGTAAACGATGGATACTGGGTGT-TGTGCGTATCGACCCGTGCAGTG 31429 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 31428 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 31392 >seq1302 Length=14205 Score = 181 bits (200), Expect = 3e-43 Identities = 231/315 (73%), Gaps = 16/315 (5%) Strand=Plus/Minus Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89 ||||||||||||||||||| ||| |||||| || ||| | |||||| |||||||||||| Sbjct 14205 GTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAA 14146 Query 90 GGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTC----AACCCCGGGA 145 ||| |||||| ||| | || | | |||||| | | | | | ||| ||| Sbjct 14145 GGGCACGTAGGCGGTG-----AATCGG-GTTGAAAGTCAAAGTCGCCAAAAACTGGCGGA 14092 Query 146 CTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTA 202 |||| | ||||| | || || ||||| || || ||||||||| | ||||| Sbjct 14091 ATGCTCTCGAAACCAATTCA---CTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTA 14035 Query 203 GCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGT 262 | |||||||| |||| || | | |||||| ||| |||||||| ||| |||| Sbjct 14034 GGGGTGAAATCCGTAAATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCC 13975 Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 || ||| ||| || ||||||| |||||||| ||| ||||||||||||||||||||||| Sbjct 13974 TACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCA 13915 Query 323 CGCCGTAAACGATGA 337 |||||||||||||| Sbjct 13914 TGCCGTAAACGATGA 13900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200384367616