Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq16 262 9e-68
seq1302 181 3e-43
>seq16
Length=45662
Score = 262 bits (290), Expect = 9e-68
Identities = 298/397 (75%), Gaps = 2/397 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 31787 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 31728
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || ||||||| || ||| | | ||
Sbjct 31727 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCACCGTAAAATCCCAGGG 31668
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||||| || || | ||||||| ||| |||| | | ||||||| |||||
Sbjct 31667 CTCAACCCTGGACAAGCGGTGGAAACTGTCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 31608
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||| |||||||||||||||||| || | | |||||||| |||||| || |
Sbjct 31607 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 31548
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||||| | | |||||||||||| ||||||| ||||||| || |||||||| ||||
Sbjct 31547 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAGACCC 31488
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371
||||||| ||||||||||||| ||||| ||||| | ||| || | | | |||
Sbjct 31487 CAGTAGTCCTAGCCGTAAACGATGGATACTGGGTGT-TGTGCGTATCGACCCGTGCAGTG 31429
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| ||||| ||||||| || |||||||||||
Sbjct 31428 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 31392
>seq1302
Length=14205
Score = 181 bits (200), Expect = 3e-43
Identities = 231/315 (73%), Gaps = 16/315 (5%)
Strand=Plus/Minus
Query 30 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAA 89
||||||||||||||||||| ||| |||||| || ||| | |||||| ||||||||||||
Sbjct 14205 GTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAA 14146
Query 90 GGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTC----AACCCCGGGA 145
||| |||||| ||| | || | | |||||| | | | | | ||| |||
Sbjct 14145 GGGCACGTAGGCGGTG-----AATCGG-GTTGAAAGTCAAAGTCGCCAAAAACTGGCGGA 14092
Query 146 CTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTA 202
|||| | ||||| | || || ||||| || || ||||||||| | |||||
Sbjct 14091 ATGCTCTCGAAACCAATTCA---CTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTA 14035
Query 203 GCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGT 262
| |||||||| |||| || | | |||||| ||| |||||||| ||| ||||
Sbjct 14034 GGGGTGAAATCCGTAAATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCC 13975
Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
|| ||| ||| || ||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct 13974 TACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCA 13915
Query 323 CGCCGTAAACGATGA 337
||||||||||||||
Sbjct 13914 TGCCGTAAACGATGA 13900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200384367616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |