Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq802 183 1e-43 seq258 158 4e-36 seq169992 87.8 6e-15 >seq802 Length=17821 Score = 183 bits (202), Expect = 1e-43 Identities = 322/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 13334 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 13275 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 13274 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 13215 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 13214 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 13157 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 13156 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 13097 Query 268 CATTGCAAACTCCGAATGC------GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | |||| || ||| | || | | ||||| Sbjct 13096 CCAGGGAAACTCCGAATACAGGCCGTCATCGTTTGTACAGACAGACTTTTG----GGGTG 13041 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 13040 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 12981 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 12980 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 12925 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 12924 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 12885 >seq258 Length=11790 Score = 158 bits (174), Expect = 4e-36 Identities = 393/590 (67%), Gaps = 44/590 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 8190 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 8131 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || ||||||||||||| ||| |||||||| ||| Sbjct 8130 ACCAGGATGAAGCTTGGGTGAAACTAAGCGGAGGTCCGAACCGACTGATGTTGAAGAATC 8071 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 8070 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 8011 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 8010 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 7956 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GC 288 | | | ||| | | ||||||| |||||||| |||| | | Sbjct 7955 -TCGGTGCGGGCCGCGGGAGCGGTACCAAATTGAGGCAAACTCTGAATACTAGATATGAC 7897 Query 289 ATCAGTTT-------TACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTC 329 ||| | || | ||| |||||| ||||| | |||| | Sbjct 7896 CTCAAAATACCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTT 7837 Query 330 CGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTT 389 | | ||||||| || | ||||| | ||||||||||||| ||||||| ||| ||| Sbjct 7836 CATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTG 7777 Query 390 AAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCAT 449 | | || ||||| || ||| ||||||| |||| ||| || | |||||||| | | | Sbjct 7776 ATA--AAGGAAGTGGGAGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCTA-CCCT 7720 Query 450 TTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATT 509 | ||||||||||||| |||||||| || || || ||| || || | |||| | Sbjct 7719 TCAAAGAGTGCGTAATAGCTCACTGATCCAGCGCTCTTGCGCCGAAGATGAACGGG-GCT 7661 Query 510 AAGTTGTCTACCGAAGCAGTGGGATCATTTATAT-GATCGGTAGGGGAGC 558 ||| ||| ||||||| ||||||| | | || |||||||||||||| Sbjct 7660 AAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATACATCGGTAGGGGAGC 7612 >seq169992 Length=351 Score = 87.8 bits (96), Expect = 6e-15 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | | |||||||| |||| ||||||||||| | ||| | || ||| Sbjct 139 GACCCGAACCTAGGTGATCTATCCATAACCAGGATGAAGCTTGGGTGAAACTAAGCAGAG 198 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 |||||||| | | |||||||| ||| | | ||||| | || ||||||||||| | | Sbjct 199 CTCCGAACCGAGTGATGTTGAAGAATCGGTGAATGAGTTATGATTAGGGGTGAAATGTCA 258 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | ||| | || |||||||||||| | |||| Sbjct 259 CTCGAACCTAGAGCTAGCTGGTTCTCCCTGAAA 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1685646133248