Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq802 183 1e-43
seq258 158 4e-36
seq169992 87.8 6e-15
>seq802
Length=17821
Score = 183 bits (202), Expect = 1e-43
Identities = 322/461 (70%), Gaps = 26/461 (6%)
Strand=Plus/Minus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93
||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| ||||
Sbjct 13334 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 13275
Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153
|| |||||||||| |||| | ||||| |||||||| ||||| ||||||||||||||
Sbjct 13274 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 13215
Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213
|| ||| | ||| |||||||||| || ||||| |||||| |||| || | | ||
Sbjct 13214 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 13157
Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267
| || | | ||||||||||| |||||||| | |||| || |||||||| |
Sbjct 13156 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 13097
Query 268 CATTGCAAACTCCGAATGC------GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321
| | ||||||||||| | |||| || ||| | || | | |||||
Sbjct 13096 CCAGGGAAACTCCGAATACAGGCCGTCATCGTTTGTACAGACAGACTTTTG----GGGTG 13041
Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381
||||| ||| ||||||| || | || || | ||||||| ||| || |
Sbjct 13040 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 12981
Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439
|| ||| || || |||| |||| || | |||| | |||| || |||||||||||
Sbjct 12980 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 12925
Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
||||| || ||| |||| |||||| |||||||| ||| ||
Sbjct 12924 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 12885
>seq258
Length=11790
Score = 158 bits (174), Expect = 4e-36
Identities = 393/590 (67%), Gaps = 44/590 (7%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61
|||||| | ||||| | ||| ||| | | |||||||| | |||||||| |||||
Sbjct 8190 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 8131
Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121
||||||||||| | ||| | || ||||||||||||| ||| |||||||| |||
Sbjct 8130 ACCAGGATGAAGCTTGGGTGAAACTAAGCGGAGGTCCGAACCGACTGATGTTGAAGAATC 8071
Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181
|| ||||||| ||||| ||||||||||| || | | ||| || ||||||||||||
Sbjct 8070 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 8011
Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236
|||||| || ||| || ||| | || |||| |||||| |||||||||
Sbjct 8010 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 7956
Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GC 288
| | | ||| | | ||||||| |||||||| |||| | |
Sbjct 7955 -TCGGTGCGGGCCGCGGGAGCGGTACCAAATTGAGGCAAACTCTGAATACTAGATATGAC 7897
Query 289 ATCAGTTT-------TACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTC 329
||| | || | ||| |||||| ||||| | |||| |
Sbjct 7896 CTCAAAATACCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTT 7837
Query 330 CGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTT 389
| | ||||||| || | ||||| | ||||||||||||| ||||||| ||| |||
Sbjct 7836 CATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTG 7777
Query 390 AAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCAT 449
| | || ||||| || ||| ||||||| |||| ||| || | |||||||| | | |
Sbjct 7776 ATA--AAGGAAGTGGGAGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCTA-CCCT 7720
Query 450 TTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATT 509
| ||||||||||||| |||||||| || || || ||| || || | |||| |
Sbjct 7719 TCAAAGAGTGCGTAATAGCTCACTGATCCAGCGCTCTTGCGCCGAAGATGAACGGG-GCT 7661
Query 510 AAGTTGTCTACCGAAGCAGTGGGATCATTTATAT-GATCGGTAGGGGAGC 558
||| ||| ||||||| ||||||| | | || ||||||||||||||
Sbjct 7660 AAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATACATCGGTAGGGGAGC 7612
>seq169992
Length=351
Score = 87.8 bits (96), Expect = 6e-15
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94
|||||||| | | |||||||| |||| ||||||||||| | ||| | || |||
Sbjct 139 GACCCGAACCTAGGTGATCTATCCATAACCAGGATGAAGCTTGGGTGAAACTAAGCAGAG 198
Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154
|||||||| | | |||||||| ||| | | ||||| | || ||||||||||| | |
Sbjct 199 CTCCGAACCGAGTGATGTTGAAGAATCGGTGAATGAGTTATGATTAGGGGTGAAATGTCA 258
Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187
| ||| | || |||||||||||| | ||||
Sbjct 259 CTCGAACCTAGAGCTAGCTGGTTCTCCCTGAAA 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1685646133248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |