Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq258 214 6e-53
seq802 190 7e-46
>seq258
Length=11790
Score = 214 bits (236), Expect = 6e-53
Identities = 398/571 (70%), Gaps = 25/571 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || |||| |||||||||||||||| ||| || ||||| | ||| ||| |
Sbjct 6440 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACC-GATCTC 6498
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| || | |||||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 6499 CGTCCGGCCTGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 6557
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || || || || |||||||||| |
Sbjct 6558 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATT 6617
Query 177 CCACTACGGTCAGAGTGGTATTTCAACAACGACTCC-ACAACCACTAGCGTGGCCGCATC 235
| | | ||||||||||| ||| | | ||| || || | | | || | | ||
Sbjct 6618 CTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGACCCCCCCGAAAGGGGGC-CTTC 6676
Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293
| | || ||||||| || | || || || | || |||||| ||| | | |||||
Sbjct 6677 TTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTGA 6734
Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352
|| | | |||||||| |||| | || | | ||||||| || | | ||
Sbjct 6735 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 6794
Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411
||||||| |||| | ||||||| | || |||||||||| |||||||||||||||
Sbjct 6795 TTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCAGGTCGGA 6853
Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471
||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 6854 ACTTACCCGACAATGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 6913
Query 472 GGGGCTTCAATTACC--CGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529
|||||||| | || | |||| || || | |||| | ||| ||||
Sbjct 6914 GGGGCTTCGGTCGCCGGCTCCTCTGTCATCA--------GATCACCAACTTCCTTGACCT 6965
Query 530 TCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
||| |||| ||||||||||||| || ||||
Sbjct 6966 TCCGGCACTGGGCAGGCGTCAGCCCCCATAC 6996
>seq802
Length=17821
Score = 190 bits (210), Expect = 7e-46
Identities = 386/571 (68%), Gaps = 43/571 (8%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| || ||||| |||||| || ||| | | |||| ||||| | | || |
Sbjct 11275 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--- 11331
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| | | |||| ||||| | | |||||||||| ||| ||||| || |||||||||
Sbjct 11332 -AGCCGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 11389
Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCAT---GGGCCAAGGTTAGAT 174
||||||||||||| ||| |||||| | ||| || | | || ||||||
Sbjct 11390 ATAAACTACCCACCTCGCAGTGTCCCGCCCTCCCCCGAATTTTCGGTGCGGCGGTTAGGC 11449
Query 175 ATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCAT 234
|||| | |||||||| ||||| | | || | | ||| | ||
Sbjct 11450 ATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCAC 11500
Query 235 CATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAA 294
| |||||||||||||||||| | | || || | |||||||||||||
Sbjct 11501 C------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACCGCGAAGCTATAGTGAA 11554
Query 295 GGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATT 353
||| | ||||||||| |||| |||| | | ||||||| || | | |||||
Sbjct 11555 GGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATT 11614
Query 354 TCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAAC 413
|||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||
Sbjct 11615 TCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTAC 11674
Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473
||| |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||
Sbjct 11675 TTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGG 11734
Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533
|||||| || ||| | | | | ||| |||| | ||||||||
Sbjct 11735 GGCTTCCAT--------TCAAA--------GCTTAGAACACTTCTCCTTTCGACCTTCCA 11778
Query 534 GCACCGGGCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||| ||||| | ||||| |||
Sbjct 11779 GCACCGGGCAGGTGTCAGACTCTATACATCG 11809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1698416179712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |