Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22]
234,012 sequences; 165,656,733 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq19 609 7e-172
seq206631 194 5e-47
>seq19
Length=8689
Score = 609 bits (674), Expect = 7e-172
Identities = 448/513 (87%), Gaps = 13/513 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| |||| |||||| |||| ||||||||||||||||||
Sbjct 5695 GTACTCATTCCAATTACCAGACTCAAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5753
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5754 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5813
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||
Sbjct 5814 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 5873
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 5874 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 5933
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----AAG--GG 293
| |||||| |||||| ||| |||||| |||||||| || |||| || ||| |
Sbjct 5934 CGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCGACGGGCAAAGCCCG 5991
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-AGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| || ||||||||| ||||||||||| | ||| |||||
Sbjct 5992 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCGAGAGTCGGGGTTTGTTGCACGTATT 6051
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| |||| || ||| |||||| |||| || |||||
Sbjct 6052 AGCTCTAGAATTACTACGGTTATCCGAGTAGCAA-ATACCATCAAACAAACTATTACTGA 6110
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 6111 TTTAATGAGCCATTCGCAGTTTCACAGTTTGAATTAGTTCATACTTACACATGCATGGCT 6170
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 6171 TAATCTTTGAGACAAGCATATGACTACTGGCAG 6203
>seq206631
Length=261
Score = 194 bits (214), Expect = 5e-47
Identities = 157/189 (83%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| ||| |||| |||||| ||| ||||||||||||||||||
Sbjct 74 GTACTCATTCCAATTACTAGAATCAAA-GAGCCCGTTATTGTTATTTATTGTCACTACCT 132
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| |||||||||| |||| || ||| ||||||||||||||||||||||| ||
Sbjct 133 CCCCGTGTCAGGATTGGGTAGTTTGTGCACCTCTTGCCTTCCTTGGATGTGGTAGCCATT 192
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||| |||| | || |||||||||||||||||| |||| || | |||||||||
Sbjct 193 TCTCTGGCTGTTTATCTGGAATCGAACCCTAATTCTCCGTCTCCTATCACCACCATGGTA 252
Query 181 GGCCACTAT 189
|||| ||||
Sbjct 253 GGCCTCTAT 261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1506865482752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |