Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq98 594 6e-165 seq28 535 5e-147 seq24621 93.3 5e-14 >seq98 Length=41871 Score = 594 bits (658), Expect = 6e-165 Identities = 729/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 ||||| | ||| |||| ||| | ||||| || || | || ||||| || || || Sbjct 41566 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 41507 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| ||| | ||| | |||||| |||| || || |||| ||||| ||||| || Sbjct 41506 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 41448 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || ||||| || ||||||||||| |||| || | | ||||| ||||| Sbjct 41447 TCCAGTAGATATTGATGGTATTCGTGAACCCGTTTCTGGATCTTTACTTTACGGAAACAA 41388 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 || || |||||||| || |||| |||| ||| || ||| | ||||| || || || Sbjct 41387 TATTATTTCTGGTGCCATTATTCCTACTTCTGCCGCTATAGGTTTGCACTTTTACCCAAT 41328 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 |||||||| ||||| | || || ||| | || ||||| ||||||| |||| | || Sbjct 41327 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 41268 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | || ||||| |||||||||||||| || ||| Sbjct 41267 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACTTAGTTTCCG 41208 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 | | |||||||| || ||||| ||||||||| || ||||| || || || ||| | || Sbjct 41207 TTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCTACCGC 41148 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||| ||| | | ||||| | ||||| || || || || | ||||||| | || || Sbjct 41147 TGTCTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCGGACGGTATGCCTTTAGGAAT 41088 Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341 |||||||||||| |||| |||| |||||||||| || || ||||| ||||||||||| || Sbjct 41087 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 41028 Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401 || || ||| | || || || || |||||||| || || || ||| |||||||||||| Sbjct 41027 ATTTCATATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 40968 Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461 || |||| || || ||| | |||| || || ||||||| ||| || || | || Sbjct 40967 TTCCTTGGTAACCTCAAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 40908 Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521 |||||| || |||||||| | || ||||| || ||||| || || ||||| || || || Sbjct 40907 TTACAAATTTGGTCAAGAAGGGGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 40848 Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581 || ||||||||||||||||| || |||||||| || || | ||||||||||| || Sbjct 40847 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGC 40788 Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641 |||||||||||| | || ||||||||||| || | ||| || || ||||| ||||| Sbjct 40787 TGCTTGGCCTGTAATAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAA 40728 Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701 | ||||||||||| |||||||| ||| | | || | ||||| | || | || || Sbjct 40727 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 40668 Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761 |||||| || | | ||||| ||| || || |||||||| ||||| || ||||| || Sbjct 40667 TTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 40608 Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 ||||||||||||||| ||||| ||||||| ||| Sbjct 40607 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGA 40575 >seq28 Length=37419 Score = 535 bits (592), Expect = 5e-147 Identities = 721/997 (72%), Gaps = 13/997 (1%) Strand=Plus/Minus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || ||||| ||||| || || ||||| || || | || ||||| ||| || ||||| Sbjct 31299 GACCGTTTTGTTTTCGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTACTTTGCT 31240 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || ||||| | || |||||||||||||||| | || Sbjct 31239 TTAGGGGGTTGGTTCACAGGTACAACTTTTGTAACCTCCTGGTATACCCATGGATTGGCC 31180 Query 161665 AGTTCCTATCTTGAGGG-TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723 || |||||| | || || ||||| || | | || || |||||| || || ||| | Sbjct 31179 AGCTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCTGCAGTTTCTACCCCTGCTAATAG 31121 Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782 | | | |||||| || || || || ||||||||||| || ||||||||||| | | Sbjct 31120 TTTAGCACATTCT-TTGTTGTTACTATGGGGTCCTGAAGCGCAAGGGGATTTTACTCGTT 31062 Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTG 161842 || ||| | || || || |||| |||||| || |||||||| ||||||| || || | Sbjct 31061 GGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGAGCTTTCGGACTAATAG 31002 Query 161843 GATTCATGCTTCGTCAGTTTGAACTTGCTCGTCTTATCGGTA----TCCGTCCTTACAAT 161898 | || ||| | ||||| |||||| ||||||| ||| || | || ||||| ||| Sbjct 31001 GTTTTATGTTACGTCAATTTGAAATTGCTCG----ATCCGTGCAATTGCGACCTTATAAT 30946 Query 161899 GCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTG 161958 || || || || |||||||| |||||||||||||| || || || || ||||| || Sbjct 30945 GCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCGCTA 30886 Query 161959 GGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTA 162018 || || || |||||||| || || ||||| || || ||||| || | ||| | Sbjct 30885 GGTCAATCCGGTTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 30826 Query 162019 CTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCA 162078 || || | ||||| || || |||||||| || || ||||| || |||||||| || || Sbjct 30825 CTGTTTTTCCAAGGGTTTCATAATTGGACACTGAACCCGTTTCATATGATGGGAGTTGCT 30766 Query 162079 GGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTC 162138 ||| | ||||| | ||| |||| | |||||||| |||| ||||| ||||| || | Sbjct 30765 GGTGTATTGGGCGCGGCTCTGCTGTGCGCTATTCATGGTGCTACTGTCGAAAATACTTTA 30706 Query 162139 TACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAG 162198 | |||| ||||| |||||||| ||| |||||| || | || |||| || || Sbjct 30705 TTTGAAGACGGTGATGGTGCAAATACATTCCGCGCTTTTAACCCAACTCAAGCCGAAGAA 30646 Query 162199 ACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGT 162258 ||||| || ||||| || || ||||| || ||||| || ||||| || |||||||| Sbjct 30645 ACTTATTCAATGGTCACCGCCAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCC 30586 Query 162259 AATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGT 162318 ||||| |||||||| |||||||||||| | || || || || | ||| | |||| || Sbjct 30585 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGC 30526 Query 162319 TCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAG 162378 || | || | | || || ||||| || || ||||| || ||||| || |||||||| Sbjct 30525 GCTCTTGGAGTAGTAGGTCTGGCTCTGAACCTGCGTGCCTATGACTTCGTTTCTCAGGAA 30466 Query 162379 ATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAAT 162438 || ||||||||||| |||||||||||||| || ||||| ||||| ||||| || || ||| Sbjct 30465 ATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTATACCAAAAATATTCTTTTAAAT 30406 Query 162439 GAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCT 162498 ||||| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||| Sbjct 30405 GAAGGCATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCC 30346 Query 162499 GAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 ||||| ||||| || | || ||||| || | ||||| Sbjct 30345 GAGGAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 30310 >seq24621 Length=2300 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 160973 TCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTT 161032 |||| || || || || || || || ||||| || || ||||| | || || || | Sbjct 2235 TCCTGGATGCAGCCGAGGATGCTGGAGTTGAGCTGCCATATTCCTGCAGGGCCGGGGCAT 2176 Query 161033 GCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTCC 161092 ||||||| |||||||| ||||||| | || || || || || || ||| || |||| Sbjct 2175 GCTCTACCTGTGCTGGGAAGATTGCGTCGGGCACAGTCGACCAGTCCGATGGTTCCTTCC 2116 Query 161093 TGGATGATGATCAACTTGAATCAGGATTTGTC-CTGACCTGCGTTGCTTATCCCACTTCT 161151 | ||||| ||||| | |||||||| || | |||||||||||| | || || ||||| Sbjct 2115 TCGATGAGAATCAAGT-GAATCAGGGTTACTTGCTGACCTGCGTTTCATACCCAACTTCA 2057 Query 161152 GAT 161154 ||| Sbjct 2056 GAT 2054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549763142493600