Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq9 697 0.0 seq22 75.2 4e-11 >seq9 Length=7799 Score = 697 bits (772), Expect = 0.0 Identities = 477/533 (89%), Gaps = 7/533 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 778 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 837 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 838 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 897 Query 127 GGCCCGCGAAGGA---CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 ||||||| ||| |||| ||| ||| | || | ||| || |||| |||| Sbjct 898 GGCCCGCCGAGGCGAGCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCCTCCGATTCA 955 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||| Sbjct 956 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCA 1014 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 1074 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 1075 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 1134 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1135 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 1194 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 1254 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1255 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1307 >seq22 Length=5377 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 3724 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 3783 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 ||||||||| || ||| | ||||||| |||||||||||| Sbjct 3784 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 3822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635109687904