Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penstemon_20grinnellii_20[genbank_20GCA_5F000737425.1_202014-08-04] 5,523 sequences; 3,663,524 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9 600 4e-169 >seq9 Length=7799 Score = 600 bits (664), Expect = 4e-169 Identities = 446/513 (87%), Gaps = 13/513 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 5369 GTACTCATTCCAATTACCAGACTCGTA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5427 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5428 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5487 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 5488 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 5547 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 5548 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 5607 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGGC--- 294 | | |||| |||||| ||| ||||||||||||||| | | ||| | | || || Sbjct 5608 CGATGGCCGTGCGATCCGTCGAGTTATTATGAATCATC--GCAGCAACGGGCAGAGCCCG 5665 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 || | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 5666 TGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 5725 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| |||| |||||| |||||| |||| |||||||| Sbjct 5726 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGGTACCATCAAACAAACTATAACTGA 5784 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||| Sbjct 5785 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 5844 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 5845 TAATCTTTGAGACAAGCATATGACTACTGGCAG 5877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510316580608