Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2 104 6e-20 seq1 98.7 3e-18 seq8 80.6 7e-13 >seq2 Length=49040938 Score = 104 bits (114), Expect = 6e-20 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 15302291 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 15302350 Query 71 ATCGGAATTACTGGGCGTAAAGCGT 95 |||||| | |||||||||||||| Sbjct 15302351 TCCGGAATGATTGGGCGTAAAGCGT 15302375 >seq1 Length=52205531 Score = 98.7 bits (108), Expect = 3e-18 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 34092282 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 34092341 Query 71 ATCGGAATTACTGGGCGT-AAAGCGT 95 |||||| | ||||||| ||||||| Sbjct 34092342 TCCGGAATGATTGGGCGTAAAAGCGT 34092367 >seq8 Length=59662532 Score = 80.6 bits (88), Expect = 7e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 281 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| |||||||| ||| ||||||||||||||||||||||| ||| |||||||| Sbjct 31025473 CGAAAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 31025529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289590869632