Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-23 seq7 73.4 5e-11 >seq8 Length=59662532 Score = 114 bits (126), Expect = 2e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | |||| | Sbjct 47420948 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 47421007 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 47421008 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 47421055 >seq7 Length=51758522 Score = 73.4 bits (80), Expect = 5e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || ||| || |||| Sbjct 31856398 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 31856340 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 | ||||||| |||||||||||| Sbjct 31856339 TATGTTTTTGGTAAACAGTCGC 31856318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694395237284