Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq10 122 2e-25
seq2 102 2e-19
seq7 84.2 6e-14
seq8 82.4 2e-13
>seq10
Length=43275151
Score = 122 bits (134), Expect = 2e-25
Identities = 106/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||| ||| | ||||| | ||||||| || ||||||
Sbjct 41824405 GCATCTTCACAGACATGTCTATTCCACCGTGTCTCTCTTCGAGACAGTACCCAGATCGTT 41824464
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| ||| ||||| | ||||||||||||||||||||| ||||| |||| |||| ||||||||
Sbjct 41824465 ATGCCTTTCGTACGGGTCGGAACTTACCCGACAAGAAATTTTGCTATCTTAAGACCGTTA 41824524
Query 133 TTGTTACGGCCG 144
| |||||| |||
Sbjct 41824525 TAGTTACGACCG 41824536
>seq2
Length=49040938
Score = 102 bits (112), Expect = 2e-19
Identities = 160/227 (70%), Gaps = 8/227 (4%)
Strand=Plus/Plus
Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129
|||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||| ||
Sbjct 33415906 GTTACGTCTTTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCG 33415965
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC-TAACCC 188
||| |||||| | |||| |||| | |||| | ||| | | || | | |
Sbjct 33415966 TTACAATTACGGTTGTCGTTCACCGAGACTTCAGTTGTCGGCTCCCC--TATCATCAAGT 33416023
Query 189 CATCAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243
|| ||| || ||||| |||||| || |||||||| || |||| | ||| ||
Sbjct 33416024 CACCAACTTCCTTGACCTTTCGGCACTAGGTAGGCGTCAGCCCGCATACATGGTCTTACG 33416083
Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290
|||||| || |||| ||| ||| ||||||| |||||||
Sbjct 33416084 ACTTTGCAAAGACTTGTGCTTTAGGTAAGCAGTCGCTCGTGCCTGGT 33416130
>seq7
Length=51758522
Score = 84.2 bits (92), Expect = 6e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254
|| |||||||||||| |||||||||||| ||| |||| | ||| || ||||| |||
Sbjct 31856402 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAG 31856343
Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|| ||||||| ||||||||||| |||||||| || |||||
Sbjct 31856342 ACCTATGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 31856297
>seq8
Length=59662532
Score = 82.4 bits (90), Expect = 2e-13
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 47420948 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 47421007
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 47421008 CGCGCCCCTAGGTATTCTCTACCTACCCAC 47421037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260791073536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |