Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq10 122 2e-25 seq2 102 2e-19 seq7 84.2 6e-14 seq8 82.4 2e-13 >seq10 Length=43275151 Score = 122 bits (134), Expect = 2e-25 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||| ||| | ||||| | ||||||| || |||||| Sbjct 41824405 GCATCTTCACAGACATGTCTATTCCACCGTGTCTCTCTTCGAGACAGTACCCAGATCGTT 41824464 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | ||| ||||| | ||||||||||||||||||||| ||||| |||| |||| |||||||| Sbjct 41824465 ATGCCTTTCGTACGGGTCGGAACTTACCCGACAAGAAATTTTGCTATCTTAAGACCGTTA 41824524 Query 133 TTGTTACGGCCG 144 | |||||| ||| Sbjct 41824525 TAGTTACGACCG 41824536 >seq2 Length=49040938 Score = 102 bits (112), Expect = 2e-19 Identities = 160/227 (70%), Gaps = 8/227 (4%) Strand=Plus/Plus Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||||| | |||||||||||||||||||| |||||||| ||||| |||||||||||| || Sbjct 33415906 GTTACGTCTTTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCG 33415965 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC-TAACCC 188 ||| |||||| | |||| |||| | |||| | ||| | | || | | | Sbjct 33415966 TTACAATTACGGTTGTCGTTCACCGAGACTTCAGTTGTCGGCTCCCC--TATCATCAAGT 33416023 Query 189 CATCAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 || ||| || ||||| |||||| || |||||||| || |||| | ||| || Sbjct 33416024 CACCAACTTCCTTGACCTTTCGGCACTAGGTAGGCGTCAGCCCGCATACATGGTCTTACG 33416083 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 |||||| || |||| ||| ||| ||||||| ||||||| Sbjct 33416084 ACTTTGCAAAGACTTGTGCTTTAGGTAAGCAGTCGCTCGTGCCTGGT 33416130 >seq7 Length=51758522 Score = 84.2 bits (92), Expect = 6e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| |||| | ||| || ||||| ||| Sbjct 31856402 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAG 31856343 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || ||||||| ||||||||||| |||||||| || ||||| Sbjct 31856342 ACCTATGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 31856297 >seq8 Length=59662532 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 47420948 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 47421007 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 47421008 CGCGCCCCTAGGTATTCTCTACCTACCCAC 47421037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260791073536