Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2 170 4e-40 seq10 154 3e-35 seq7 141 2e-31 seq4 77.0 7e-12 seq8 73.4 8e-11 >seq2 Length=49040938 Score = 170 bits (188), Expect = 4e-40 Identities = 214/290 (74%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 64 GTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 123 |||||| ||||||||| |||||||||||| |||||||| ||||| |||||||||||| || Sbjct 33415906 GTTACGTCTTTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCG 33415965 Query 124 TTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAA 179 ||| | |||||| | |||| || | | ||| |||| | ||| | | | || | | Sbjct 33415966 TTACAATTACGGTTGTCGTTCACCGAGACTTCAGTTGTCGGCTCCCCTATCATCAAGTCA 33416025 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 | | |||| ||||| | |||| || |||||||||| | |||||| ||||| |||| Sbjct 33416026 CCAACTTCCTTGACCTTTCGGCACTAGGTAGGCGTCAGCCCGCATACATGGTCTTACGAC 33416085 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT---GCGGCCTG 296 || ||| | || |||| ||| ||||| |||||||| | |||| || || | ||| Sbjct 33416086 TTTGCAAAGACTTGTGCTTTAGGTAAGCAGTCGCTCGTGCCTGGTCACTACAACCCCCTT 33416145 Query 297 TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGT 346 | || ||||||||||||| || || ||| |||| |||||| ||||| Sbjct 33416146 TGTGAG-GAGGCACCCCTTCTTCCGAAATTATGGGGCTATTTTGTCGAGT 33416194 >seq10 Length=43275151 Score = 154 bits (170), Expect = 3e-35 Identities = 206/283 (73%), Gaps = 9/283 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||| ||||| |||| | | |||||||| |||| |||||| Sbjct 41824405 GCATCTTCACAGACATGTCTATTCCACCGTGTCTCTCTTCGAGACAGTACCCAGATCGTT 41824464 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | ||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||||||| Sbjct 41824465 ATGCCTTTCGTACGGGTCGGAACTTACCCGACAAGAAATTTTGCTATCTTAAGACCGTTA 41824524 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGT--TCA--CTGCTTCGATTGCTCTA---- 178 |||||||| ||| ||| | | | || || ||| | ||| | | | || Sbjct 41824525 TAGTTACGACCGTTGTTCATCGAGATTTTGGTCGTCAGTCAGCTCCCCTATCATTAAGTT 41824584 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || | | || ||||||| | || |||| | | || | || ||| || | || ||| Sbjct 41824585 ACCAACTTCATTGACCTTCCGGTTCCAGGCAAGTGCCAAC-CCCATAAATGATTTTACGA 41824643 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT 281 ||| |||| ||||||||||||||||| ||||| |||| || Sbjct 41824644 CTTTACAGATACCTGTGTTTTTGGTAATTAGTCGTCTGGGTCT 41824686 >seq7 Length=51758522 Score = 141 bits (156), Expect = 2e-31 Identities = 122/149 (82%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| || | Sbjct 31856404 CCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGG 31856345 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGA 303 | |||| |||||||||||||||||||| |||||| || ||||| ||| | || Sbjct 31856344 AGACCTATGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAG- 31856286 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGG 332 |||||||||||||||| ||||||||||| Sbjct 31856285 GAGGCACCCCTTCTCCCGAAGTTACGGGG 31856257 >seq4 Length=45960019 Score = 77.0 bits (84), Expect = 7e-12 Identities = 69/87 (79%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| ||| ||| ||| |||||| || ||||| ||||| | |||| | || Sbjct 29721707 CCTTGACCTTCCGACACTGGGTAGGTGTCAGCCCCCATACACGGTCTTACAACTTTGTAG 29721648 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||| ||||||||||||| ||| || Sbjct 29721647 AGACCTATGTTTTTGGTAAATAGTTGC 29721621 >seq8 Length=59662532 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 47420947 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 47420994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062392478208