Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq7 187 7e-45 seq1 140 1e-30 seq11 93.3 1e-16 seq10 93.3 1e-16 seq4 89.7 2e-15 seq2 82.4 2e-13 >seq7 Length=51758522 Score = 187 bits (206), Expect = 7e-45 Identities = 143/168 (85%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 192 AGATGTTGGGTTAAGT-CCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAG 250 ||| |||||||||||| |||||||||||||||||||| | |||||||||| ||| || Sbjct 31854954 AGACGTTGGGTTAAGTACCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCAAGATTGAG 31854895 Query 251 TTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAAT 310 || || || || | |||||||||||| || ||||||||||||| ||| |||||||| | Sbjct 31854894 TTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGT 31854835 Query 311 CATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 31854834 CATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGACAAT 31854787 >seq1 Length=52205531 Score = 140 bits (154), Expect = 1e-30 Identities = 169/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 138 CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGT 197 |||||||| ||| | ||||||| |||||||||||| |||| | ||||||| | || Sbjct 7472988 CCTTCGGGA-ACACGGACACAGGTGGTGCATGGTTGTCATCAGGTTGTGTCGTAAAGGGT 7472930 Query 198 TGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCA 257 | | ||||||||| |||| || |||| | | |||||| ||| |||||||| || | Sbjct 7472929 TTGATTAAGTCCCACAACATGC--AACCTTCGTGTTTAGTTTCCAAGATTAAGTTTGGAA 7472872 Query 258 CTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATG 317 | |||| || || |||||| || || ||||| ||| ||| ||| |||| |||||||| Sbjct 7472871 CCCTAACAAGATTGTCGGTGATAAGCCAAAGGAAAGTGAGGATGACATCAAGTCATCATG 7472812 Query 318 CCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 |||||||| ||| ||| | ||||||||||||| ||||||| Sbjct 7472811 TCCCTTATGTCCTGGATGACATATGTGCTACAATGGAATGGACAAAGG 7472764 >seq11 Length=50367376 Score = 93.3 bits (102), Expect = 1e-16 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||| | | || ||||||| ||||||||| ||| Sbjct 43229747 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCATAAGGTGTTGGGATAAGTCCCGGAAC 43229806 Query 216 GAGCGCAACCC 226 ||||||||||| Sbjct 43229807 GAGCGCAACCC 43229817 >seq10 Length=43275151 Score = 93.3 bits (102), Expect = 1e-16 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 ||| || ||| ||| || ||||||||||||||||| |||||||||| || |||||| Sbjct 3100139 AGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAG 3100080 Query 446 CTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACG 490 | ||||||||||||||||| | |||| ||| | |||||||| || Sbjct 3100079 CCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCG 3100034 >seq4 Length=45960019 Score = 89.7 bits (98), Expect = 2e-15 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467 |||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||| | Sbjct 8318774 TCAGTTCGGATTGTAGGTTGCAACTCGCCTACATGAAGCCGAAATCGCTAGTAATCGTCG 8318715 Query 468 ATCAG-CATGCTACGGTGAATACGTT 492 ||| ||| | |||||||| |||| Sbjct 8318714 GACAGCCATACGGCGGTGAATTCGTT 8318689 >seq2 Length=49040938 Score = 82.4 bits (90), Expect = 2e-13 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| ||| | || ||||||||| ||||| ||| |||| || | | || ||||| Sbjct 21431352 GACTGCCATTGATATACTGGAGGAAGGAGGGGATGACATCAAGTCCGCCTTACCTTTATG 21431411 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||| ||||||||||| | ||||| || ||| | | | |||| | Sbjct 21431412 GGCTGGGCCACACACATGCTACAATGGCAATTACAATGGAAAGCAAGATTGTAAGGTGGA 21431471 Query 387 GCAAATCCCATAAAGTTGTT 406 |||||||| | || ||||| Sbjct 21431472 GCAAATCCGAAAAGATTGTT 21431491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503989351680