Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq7 187 7e-45
seq1 140 1e-30
seq11 93.3 1e-16
seq10 93.3 1e-16
seq4 89.7 2e-15
seq2 82.4 2e-13
>seq7
Length=51758522
Score = 187 bits (206), Expect = 7e-45
Identities = 143/168 (85%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 192 AGATGTTGGGTTAAGT-CCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAG 250
||| |||||||||||| |||||||||||||||||||| | |||||||||| ||| ||
Sbjct 31854954 AGACGTTGGGTTAAGTACCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCAAGATTGAG 31854895
Query 251 TTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAAT 310
|| || || || | |||||||||||| || ||||||||||||| ||| |||||||| |
Sbjct 31854894 TTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGT 31854835
Query 311 CATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358
|||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 31854834 CATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGACAAT 31854787
>seq1
Length=52205531
Score = 140 bits (154), Expect = 1e-30
Identities = 169/228 (74%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 138 CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGT 197
|||||||| ||| | ||||||| |||||||||||| |||| | ||||||| | ||
Sbjct 7472988 CCTTCGGGA-ACACGGACACAGGTGGTGCATGGTTGTCATCAGGTTGTGTCGTAAAGGGT 7472930
Query 198 TGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCA 257
| | ||||||||| |||| || |||| | | |||||| ||| |||||||| || |
Sbjct 7472929 TTGATTAAGTCCCACAACATGC--AACCTTCGTGTTTAGTTTCCAAGATTAAGTTTGGAA 7472872
Query 258 CTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATG 317
| |||| || || |||||| || || ||||| ||| ||| ||| |||| ||||||||
Sbjct 7472871 CCCTAACAAGATTGTCGGTGATAAGCCAAAGGAAAGTGAGGATGACATCAAGTCATCATG 7472812
Query 318 CCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
|||||||| ||| ||| | ||||||||||||| |||||||
Sbjct 7472811 TCCCTTATGTCCTGGATGACATATGTGCTACAATGGAATGGACAAAGG 7472764
>seq11
Length=50367376
Score = 93.3 bits (102), Expect = 1e-16
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215
||||||| ||||||| ||||||||||||||| | | || ||||||| ||||||||| |||
Sbjct 43229747 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCATAAGGTGTTGGGATAAGTCCCGGAAC 43229806
Query 216 GAGCGCAACCC 226
|||||||||||
Sbjct 43229807 GAGCGCAACCC 43229817
>seq10
Length=43275151
Score = 93.3 bits (102), Expect = 1e-16
Identities = 85/106 (80%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445
||| || ||| ||| || ||||||||||||||||| |||||||||| || ||||||
Sbjct 3100139 AGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAG 3100080
Query 446 CTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACG 490
| ||||||||||||||||| | |||| ||| | |||||||| ||
Sbjct 3100079 CCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCG 3100034
>seq4
Length=45960019
Score = 89.7 bits (98), Expect = 2e-15
Identities = 72/86 (84%), Gaps = 1/86 (1%)
Strand=Plus/Minus
Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467
|||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||| |
Sbjct 8318774 TCAGTTCGGATTGTAGGTTGCAACTCGCCTACATGAAGCCGAAATCGCTAGTAATCGTCG 8318715
Query 468 ATCAG-CATGCTACGGTGAATACGTT 492
||| ||| | |||||||| ||||
Sbjct 8318714 GACAGCCATACGGCGGTGAATTCGTT 8318689
>seq2
Length=49040938
Score = 82.4 bits (90), Expect = 2e-13
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
||||||| ||| | || ||||||||| ||||| ||| |||| || | | || |||||
Sbjct 21431352 GACTGCCATTGATATACTGGAGGAAGGAGGGGATGACATCAAGTCCGCCTTACCTTTATG 21431411
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386
||||| |||||| ||||||||||| | ||||| || ||| | | | |||| |
Sbjct 21431412 GGCTGGGCCACACACATGCTACAATGGCAATTACAATGGAAAGCAAGATTGTAAGGTGGA 21431471
Query 387 GCAAATCCCATAAAGTTGTT 406
|||||||| | || |||||
Sbjct 21431472 GCAAATCCGAAAAGATTGTT 21431491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503989351680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |