Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq11 297 3e-78 seq1 259 8e-67 seq5 253 3e-65 seq10 230 4e-58 seq2 224 2e-56 seq6 140 5e-31 >seq11 Length=50367376 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21185723 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 21185782 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 21185783 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21185840 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 21185841 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21185900 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 21185901 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21185960 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 21185961 AGAAAGAGCTCTCAGTCTGTC 21185981 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21272189 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 21272248 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 21272249 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21272306 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 21272307 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21272366 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 21272367 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21272426 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 21272427 AGAAAGAGCTCTCAGTCTGTC 21272447 Score = 286 bits (316), Expect = 6e-75 Identities = 214/247 (87%), Gaps = 7/247 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 21278823 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT-GCCTC 21278881 Query 76 AAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG- 132 |||||||| | | || |||| | |||||||||||||||||| ||| | | Sbjct 21278882 AAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTAC 21278939 Query 133 -TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 || | ||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct 21278940 CTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 21278999 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 21279000 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 21279059 Query 252 ATCTGTC 258 |||||| Sbjct 21279060 GTCTGTC 21279066 Score = 269 bits (298), Expect = 4e-70 Identities = 219/261 (84%), Gaps = 7/261 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||||||||||| || |||||||||||||| Sbjct 21201004 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGGTGTTC-AAGGGCATCACAGA 21201062 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 21201063 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21201120 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 21201121 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21201180 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 21201181 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21201240 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 21201241 AGAAAGAGCTCTCAGTCTGTC 21201261 >seq1 Length=52205531 Score = 259 bits (286), Expect = 8e-67 Identities = 205/245 (84%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12132509 TCATTATAGCGCTCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 12132450 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG--T 133 |||||||| | | || | | |||||||||||||||||| ||| | | | Sbjct 12132449 AAACTTCCGTGGCCTAAGTGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCT 12132390 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | ||||||||||||||| |||||| |||||||| | |||||||| ||||||||| Sbjct 12132389 CCACATAGCTATTTAGCAGGTTGAGGTCTTGTTCGTTAACAGAATTAACAAGACAAATCG 12132330 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| | Sbjct 12132329 CTCCACCAACTAAGAAGGGCCATGCACCACCACCCGTAGAATCAAGAAAGAGCTCTCAGT 12132270 Query 254 CTGTC 258 ||||| Sbjct 12132269 CTGTC 12132265 >seq5 Length=40819286 Score = 253 bits (280), Expect = 3e-65 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| Sbjct 12974761 TCAGTGTAGCGCGCGTGTGGCCAAGAACATCTAAGGGCATCACAGACCTATTATTGCCTC 12974702 Query 76 AAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG- 132 |||| ||| | | || |||| |||||||||||||||||| ||| | | Sbjct 12974701 AAACATCCGTGGCCT--AAGCGGTCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTAC 12974644 Query 133 -TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 || | ||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct 12974643 CTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 12974584 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | | Sbjct 12974583 CGCTCCACCAACTAAGAACGACCATGCACCACCGCCCATAGAATCAAGAAAAAGCTCTGA 12974524 Query 252 ATCTGTC 258 |||||| Sbjct 12974523 GTCTGTC 12974517 >seq10 Length=43275151 Score = 230 bits (254), Expect = 4e-58 Identities = 180/212 (85%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 51 GGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTC 108 ||||||||||||||||||||||||||||||||| | | || |||| | |||||||||| Sbjct 25056011 GGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTC 25056068 Query 109 TAAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTT 166 |||||||| ||| | | || | ||||||||||||| | |||||||||| Sbjct 25056069 TAAGAAGCTGGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTT 25056128 Query 167 CGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 25056129 CGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCAC 25056188 Query 227 CCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| ||| |||||| Sbjct 25056189 CCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 25056220 >seq2 Length=49040938 Score = 224 bits (248), Expect = 2e-56 Identities = 179/211 (85%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCT 109 || ||||||||||||||||||||||||||| | | |||| |||| | ||||||||||| Sbjct 5468337 GCCTCACAGACCTGTTATTGCCTCAAACTTTCGT-GGCTT-AAGCGGCCATAGTCCCTCT 5468280 Query 110 AAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167 ||||||| |||| | | || | ||||||||||||| | ||||||||||| Sbjct 5468279 AAGAAGCTAGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTC 5468220 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5468219 GTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACC 5468160 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| ||| |||||| Sbjct 5468159 CATAGAATCAAGAAAGAGCTCTCAGTCTGTC 5468129 Score = 212 bits (234), Expect = 1e-52 Identities = 202/257 (79%), Gaps = 16/257 (6%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 9191358 ACTCGTTGAATACATCAGTGTAGCGCGCGTGTGGCCCAAAACATCTAAGGGCATCACAGA 9191417 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| || ||| || | || Sbjct 9191418 CCTGTTATTGCCTCAAACTTCCGTCC-CTCTAAGAAGATGGTCGTG----GAGGGTTACC 9191472 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| ||||| |||||||||||| | |||||||||| ||| ||||||||| Sbjct 9191473 TCCA--CATAG---------CTATTTAGCAGGCTGAGGTCTCGTTTATTAACGGAATTAA 9191521 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 9191522 CCAGACAAATCGCTCCATCAACTAAGAACGACCATGCACCACGACCCATAGAATAAAGAA 9191581 Query 242 AGAGCTATCAATCTGTC 258 | |||| ||| | |||| Sbjct 9191582 AAAGCTCTCAGTTTGTC 9191598 >seq6 Length=31977256 Score = 140 bits (154), Expect = 5e-31 Identities = 83/87 (95%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3327221 TTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 3327162 Query 229 ATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||||||||||||||| ||| ||| Sbjct 3327161 ATAGAATCAAGAAAGAGCTCTCAGTCT 3327135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794534948