Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq11 297 3e-78
seq1 259 8e-67
seq5 253 3e-65
seq10 230 4e-58
seq2 224 2e-56
seq6 140 5e-31
>seq11
Length=50367376
Score = 297 bits (328), Expect = 3e-78
Identities = 224/261 (86%), Gaps = 6/261 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21185723 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 21185782
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | |||||||||||||||||| |
Sbjct 21185783 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21185840
Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | || | ||||||||||||| | ||||||||||||||| |||||
Sbjct 21185841 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21185900
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21185901 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21185960
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||| ||||||
Sbjct 21185961 AGAAAGAGCTCTCAGTCTGTC 21185981
Score = 297 bits (328), Expect = 3e-78
Identities = 224/261 (86%), Gaps = 6/261 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21272189 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 21272248
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | |||||||||||||||||| |
Sbjct 21272249 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21272306
Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | || | ||||||||||||| | ||||||||||||||| |||||
Sbjct 21272307 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21272366
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21272367 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21272426
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||| ||||||
Sbjct 21272427 AGAAAGAGCTCTCAGTCTGTC 21272447
Score = 286 bits (316), Expect = 6e-75
Identities = 214/247 (87%), Gaps = 7/247 (3%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 21278823 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT-GCCTC 21278881
Query 76 AAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG- 132
|||||||| | | || |||| | |||||||||||||||||| ||| | |
Sbjct 21278882 AAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTAC 21278939
Query 133 -TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
|| | ||||||||||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 21278940 CTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 21278999
Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 21279000 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 21279059
Query 252 ATCTGTC 258
||||||
Sbjct 21279060 GTCTGTC 21279066
Score = 269 bits (298), Expect = 4e-70
Identities = 219/261 (84%), Gaps = 7/261 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||| || ||||||||||||||
Sbjct 21201004 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGGTGTTC-AAGGGCATCACAGA 21201062
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | |||||||||||||||||| |
Sbjct 21201063 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 21201120
Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | || | ||||||||||||| | ||||||||||||||| |||||
Sbjct 21201121 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 21201180
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21201181 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 21201240
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||| ||||||
Sbjct 21201241 AGAAAGAGCTCTCAGTCTGTC 21201261
>seq1
Length=52205531
Score = 259 bits (286), Expect = 8e-67
Identities = 205/245 (84%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12132509 TCATTATAGCGCTCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 12132450
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG--T 133
|||||||| | | || | | |||||||||||||||||| ||| | | |
Sbjct 12132449 AAACTTCCGTGGCCTAAGTGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCT 12132390
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | ||||||||||||||| |||||| |||||||| | |||||||| |||||||||
Sbjct 12132389 CCACATAGCTATTTAGCAGGTTGAGGTCTTGTTCGTTAACAGAATTAACAAGACAAATCG 12132330
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |
Sbjct 12132329 CTCCACCAACTAAGAAGGGCCATGCACCACCACCCGTAGAATCAAGAAAGAGCTCTCAGT 12132270
Query 254 CTGTC 258
|||||
Sbjct 12132269 CTGTC 12132265
>seq5
Length=40819286
Score = 253 bits (280), Expect = 3e-65
Identities = 206/247 (83%), Gaps = 6/247 (2%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||
Sbjct 12974761 TCAGTGTAGCGCGCGTGTGGCCAAGAACATCTAAGGGCATCACAGACCTATTATTGCCTC 12974702
Query 76 AAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG- 132
|||| ||| | | || |||| |||||||||||||||||| ||| | |
Sbjct 12974701 AAACATCCGTGGCCT--AAGCGGTCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTAC 12974644
Query 133 -TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
|| | ||||||||||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 12974643 CTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 12974584
Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
| |||||||||||||||||| |||||||||||| ||||||||||||||||| |||| | |
Sbjct 12974583 CGCTCCACCAACTAAGAACGACCATGCACCACCGCCCATAGAATCAAGAAAAAGCTCTGA 12974524
Query 252 ATCTGTC 258
||||||
Sbjct 12974523 GTCTGTC 12974517
>seq10
Length=43275151
Score = 230 bits (254), Expect = 4e-58
Identities = 180/212 (85%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 51 GGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTC 108
||||||||||||||||||||||||||||||||| | | || |||| | ||||||||||
Sbjct 25056011 GGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTC 25056068
Query 109 TAAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTT 166
|||||||| ||| | | || | ||||||||||||| | ||||||||||
Sbjct 25056069 TAAGAAGCTGGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTT 25056128
Query 167 CGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 25056129 CGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCAC 25056188
Query 227 CCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||| ||| ||||||
Sbjct 25056189 CCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 25056220
>seq2
Length=49040938
Score = 224 bits (248), Expect = 2e-56
Identities = 179/211 (85%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCT 109
|| ||||||||||||||||||||||||||| | | |||| |||| | |||||||||||
Sbjct 5468337 GCCTCACAGACCTGTTATTGCCTCAAACTTTCGT-GGCTT-AAGCGGCCATAGTCCCTCT 5468280
Query 110 AAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167
||||||| |||| | | || | ||||||||||||| | |||||||||||
Sbjct 5468279 AAGAAGCTAGCCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTC 5468220
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5468219 GTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACC 5468160
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||| ||| ||||||
Sbjct 5468159 CATAGAATCAAGAAAGAGCTCTCAGTCTGTC 5468129
Score = 212 bits (234), Expect = 1e-52
Identities = 202/257 (79%), Gaps = 16/257 (6%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 9191358 ACTCGTTGAATACATCAGTGTAGCGCGCGTGTGGCCCAAAACATCTAAGGGCATCACAGA 9191417
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | || ||| || ||| || | ||
Sbjct 9191418 CCTGTTATTGCCTCAAACTTCCGTCC-CTCTAAGAAGATGGTCGTG----GAGGGTTACC 9191472
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| ||||| |||||||||||| | |||||||||| ||| |||||||||
Sbjct 9191473 TCCA--CATAG---------CTATTTAGCAGGCTGAGGTCTCGTTTATTAACGGAATTAA 9191521
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 9191522 CCAGACAAATCGCTCCATCAACTAAGAACGACCATGCACCACGACCCATAGAATAAAGAA 9191581
Query 242 AGAGCTATCAATCTGTC 258
| |||| ||| | ||||
Sbjct 9191582 AAAGCTCTCAGTTTGTC 9191598
>seq6
Length=31977256
Score = 140 bits (154), Expect = 5e-31
Identities = 83/87 (95%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3327221 TTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 3327162
Query 229 ATAGAATCAAGAAAGAGCTATCAATCT 255
||||||||||||||||||| ||| |||
Sbjct 3327161 ATAGAATCAAGAAAGAGCTCTCAGTCT 3327135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796794534948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |