Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq11 417 1e-114 seq7 385 8e-105 seq3 385 8e-105 seq12 107 3e-21 seq9 95.1 2e-17 seq2 86.0 1e-14 >seq11 Length=50367376 Score = 417 bits (462), Expect = 1e-114 Identities = 269/293 (92%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 21156676 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21156734 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 21156735 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21156794 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21156795 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21156854 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 21156855 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21156914 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 21156915 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21156967 Score = 417 bits (462), Expect = 1e-114 Identities = 269/293 (92%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 21310520 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21310578 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 21310579 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21310638 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21310639 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21310698 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 21310699 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21310758 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 21310759 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21310811 Score = 345 bits (382), Expect = 7e-93 Identities = 250/293 (85%), Gaps = 21/293 (7%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||| Sbjct 21239753 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAA--------- 21239802 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 21239803 -----------ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21239851 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21239852 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21239911 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 21239912 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21239971 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 21239972 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21240024 Score = 84.2 bits (92), Expect = 4e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 || || ||| |||| ||||||| ||| ||||||||||||||||||||||| |||||| || Sbjct 39458615 CTAGCTCCTTTAGCTTCAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGG 39458674 Query 285 TTTGTATTC 293 || |||||| Sbjct 39458675 TTCGTATTC 39458683 >seq7 Length=51758522 Score = 385 bits (426), Expect = 8e-105 Identities = 262/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||| | |||| | | || ||||||||||||||||||||||| |||||| Sbjct 24164219 TACTAGGTTGAATTTCTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCGGTCTCA 24164277 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| |||||||||||||||||| ||||| || || ||||||||||||||| |||| || Sbjct 24164278 CGACAGTCTAAACCCAGCTCACGCTCCCTGTTGGTTGGTGAACAATCCAACACTTAGTGA 24164337 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24164338 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 24164397 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 24164398 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 24164457 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||| ||||| |||||| |||| |||||| Sbjct 24164458 CAAATTCCGAAGGACTAAAGGATCGATACGCCACGCTTTCACGGTTCGTATTC 24164510 Score = 363 bits (402), Expect = 3e-98 Identities = 257/293 (88%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | | ||||| |||||||||||||||| |||||||| Sbjct 24320389 TACTAGGTTGAATTACTATTGAGAC-ATTGTCATTAGTAGGGTAAAACTAATCTGTCTCA 24320447 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || |||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 24320448 CGATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 24320507 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||| ||| Sbjct 24320508 ATTCTACTTCACAATGATAGGAAGAGTCGACATCGAAGGATCAAAAAGCAATGTCGTTAT 24320567 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | Sbjct 24320568 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTAGCTT 24320627 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || |||||||||||| |||||||||| ||||| |||| |||||| Sbjct 24320628 CAAATTATGAAGGACTAAAGGATTGATAGGCCACGCTTTCTCGGTTCGTATTC 24320680 >seq3 Length=52284309 Score = 385 bits (426), Expect = 8e-105 Identities = 262/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||| ||||||| Sbjct 17884823 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACTTGTCTCA 17884765 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| || Sbjct 17884764 CGACGGTCTAAACCCAGCTCGCGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 17884705 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 17884704 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAAAAAAGCAACGTCGCTAT 17884645 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 17884644 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 17884585 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || ||||||||||||||||||||||| |||||| || | ||||| Sbjct 17884584 CAAATTCTGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGCTCATATTC 17884532 >seq12 Length=328161 Score = 107 bits (118), Expect = 3e-21 Identities = 64/67 (96%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAA 243 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 1395 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAA 1336 Query 244 ATTTCGA 250 ||| ||| Sbjct 1335 ATTCCGA 1329 >seq9 Length=37469608 Score = 95.1 bits (104), Expect = 2e-17 Identities = 89/111 (80%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||| |||| |||||||||||| | ||| Sbjct 5956961 TACTAGGTTGAATTACTATTGTGAC-ACTGTCATCAATAGG-TAAAACTAACCTATTTCA 5956904 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||| ||||| ||| ||||||| | | |||||| ||||||||||| Sbjct 5956903 TGACGGTTTAAACTCAGACCACGTTCTAAAGTGGTGGGTAAACAATCCAAC 5956853 >seq2 Length=49040938 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| || Sbjct 5491478 TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCAC-TACCCTTTT 5491421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854393950848