Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq11 417 1e-114
seq7 385 8e-105
seq3 385 8e-105
seq12 107 3e-21
seq9 95.1 2e-17
seq2 86.0 1e-14
>seq11
Length=50367376
Score = 417 bits (462), Expect = 1e-114
Identities = 269/293 (92%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 21156676 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21156734
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 21156735 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21156794
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21156795 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21156854
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 21156855 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21156914
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 21156915 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21156967
Score = 417 bits (462), Expect = 1e-114
Identities = 269/293 (92%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 21310520 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21310578
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 21310579 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21310638
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21310639 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21310698
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 21310699 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21310758
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 21310759 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21310811
Score = 345 bits (382), Expect = 7e-93
Identities = 250/293 (85%), Gaps = 21/293 (7%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || ||||||||||||||||||||||
Sbjct 21239753 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAA--------- 21239802
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 21239803 -----------ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21239851
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21239852 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21239911
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 21239912 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21239971
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 21239972 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21240024
Score = 84.2 bits (92), Expect = 4e-14
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284
|| || ||| |||| ||||||| ||| ||||||||||||||||||||||| |||||| ||
Sbjct 39458615 CTAGCTCCTTTAGCTTCAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGG 39458674
Query 285 TTTGTATTC 293
|| ||||||
Sbjct 39458675 TTCGTATTC 39458683
>seq7
Length=51758522
Score = 385 bits (426), Expect = 8e-105
Identities = 262/293 (89%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||| | |||| | | || ||||||||||||||||||||||| ||||||
Sbjct 24164219 TACTAGGTTGAATTTCTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCGGTCTCA 24164277
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| |||||||||||||||||| ||||| || || ||||||||||||||| |||| ||
Sbjct 24164278 CGACAGTCTAAACCCAGCTCACGCTCCCTGTTGGTTGGTGAACAATCCAACACTTAGTGA 24164337
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24164338 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 24164397
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 24164398 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 24164457
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| ||||||||||||||||| ||||| |||||| |||| ||||||
Sbjct 24164458 CAAATTCCGAAGGACTAAAGGATCGATACGCCACGCTTTCACGGTTCGTATTC 24164510
Score = 363 bits (402), Expect = 3e-98
Identities = 257/293 (88%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | | ||||| |||||||||||||||| ||||||||
Sbjct 24320389 TACTAGGTTGAATTACTATTGAGAC-ATTGTCATTAGTAGGGTAAAACTAATCTGTCTCA 24320447
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|| |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 24320448 CGATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 24320507
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| |||| ||||||||||||| |||||||||||||||||||||||| |||| |||
Sbjct 24320508 ATTCTACTTCACAATGATAGGAAGAGTCGACATCGAAGGATCAAAAAGCAATGTCGTTAT 24320567
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
Sbjct 24320568 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTAGCTT 24320627
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| || |||||||||||| |||||||||| ||||| |||| ||||||
Sbjct 24320628 CAAATTATGAAGGACTAAAGGATTGATAGGCCACGCTTTCTCGGTTCGTATTC 24320680
>seq3
Length=52284309
Score = 385 bits (426), Expect = 8e-105
Identities = 262/293 (89%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||| |||||||
Sbjct 17884823 TACTAGGTTGAATTACTATTGCGAC-ACTATCATCAGTAGGGTAAAACTAACTTGTCTCA 17884765
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||
Sbjct 17884764 CGACGGTCTAAACCCAGCTCGCGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 17884705
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 17884704 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAAAAAAGCAACGTCGCTAT 17884645
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 17884644 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 17884585
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| || ||||||||||||||||||||||| |||||| || | |||||
Sbjct 17884584 CAAATTCTGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGCTCATATTC 17884532
>seq12
Length=328161
Score = 107 bits (118), Expect = 3e-21
Identities = 64/67 (96%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 184 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAA 243
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1395 CGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAA 1336
Query 244 ATTTCGA 250
||| |||
Sbjct 1335 ATTCCGA 1329
>seq9
Length=37469608
Score = 95.1 bits (104), Expect = 2e-17
Identities = 89/111 (80%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || ||||||| |||| |||||||||||| | |||
Sbjct 5956961 TACTAGGTTGAATTACTATTGTGAC-ACTGTCATCAATAGG-TAAAACTAACCTATTTCA 5956904
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111
||||||| ||||| ||| ||||||| | | |||||| |||||||||||
Sbjct 5956903 TGACGGTTTAAACTCAGACCACGTTCTAAAGTGGTGGGTAAACAATCCAAC 5956853
>seq2
Length=49040938
Score = 86.0 bits (94), Expect = 1e-14
Identities = 55/59 (93%), Gaps = 1/59 (2%)
Strand=Plus/Minus
Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||
Sbjct 5491478 TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCAC-TACCCTTTT 5491421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854393950848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |