Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq8 168 1e-39
seq7 120 6e-25
seq10 111 3e-22
seq3 109 1e-21
seq2 98.7 2e-18
seq6 95.1 2e-17
seq11 77.0 6e-12
>seq8
Length=59662532
Score = 168 bits (186), Expect = 1e-39
Identities = 177/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| ||||||| || |||||||||||
Sbjct 24480915 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGC 24480974
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | || ||| | || | | |||||||||||| |||||
Sbjct 24480975 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 24481033
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 24481034 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 24481093
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || |||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 24481094 TGCCGAGTGGAGGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 24481143
>seq7
Length=51758522
Score = 120 bits (132), Expect = 6e-25
Identities = 146/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 148 GCCTCC-CAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC 206
|||||| ||||| |||||||||||| ||||| | |||| | || ||| | ||
Sbjct 7683282 GCCTCCTCAAAG-GTAACGGAGGCGTGCAAAGGTTTCCTCGAGTCAGACGGAGA-TTGGC 7683339
Query 207 GCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265
| | ||||||||| || ||||| |||||||||| | | || | ||| ||||||||| |
Sbjct 7683340 CCTCGAGTGCAAAGACAGAAGGGAGTTTGACTGCAAGATCCACCTGTCGAGCAGGGACAA 7683399
Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325
|||||| |||| ||||||| || ||| || ||||| | ||||||| ||| |||||||
Sbjct 7683400 AAGTCGACCTTAGTGATCCGACGATGCCGAGTGGAAGGATCGTCGCTGAACGAATAAAAG 7683459
Query 326 CTACCCTGGGGATA 339
||| || ||||||
Sbjct 7683460 TTACTCTAGGGATA 7683473
>seq10
Length=43275151
Score = 111 bits (122), Expect = 3e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| |||| | |||||||| | |||| | ||| ||||||||| ||| ||
Sbjct 5713472 AGTGCAAAGGCAGAAGGAAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACAAAAATC 5713413
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| |||| ||||||| |||||| || ||||| || | || ||| ||||||||||| |||
Sbjct 5713412 GACCTTAGTGATCCGACGGTGCCGAGTGGAAGGGTCTTCACTCAACGGATAAAAGTTACT 5713353
Query 331 CTGGGGATA 339
|| |||||
Sbjct 5713352 CTAAGGATA 5713344
>seq3
Length=52284309
Score = 109 bits (120), Expect = 1e-21
Identities = 165/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|| ||||| |||| | |||||| ||||||| ||||||| || |||||| ||||
Sbjct 23298512 GGAACAGTCTCAGGAAGACAGTTTCTATGGGGCGTATGCCTCCCCAAAGGTAACGAAGGC 23298571
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATG-CGCAC-AGTGCAAAGGCAAAAGGG 228
||||| | |||| | || | | | || | | | ||||||||| || |||||
Sbjct 23298572 ATGCAAAGGTTTCCTCGGGCCAGACGAAGAT--TGACCCTCGAGTGCAAAGACAGAAGGG 23298629
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
| |||||| | | |||| | ||| || ||||||||||||| | ||| | ||| | ||
Sbjct 23298630 AGCTTGACTACAAGACCCACCCGTCGAGTAGGGACGAAAGTCAGCTTTAGTCATCTGACG 23298689
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| |||| |||||| ||||||||||| ||| | ||||||
Sbjct 23298690 GTGTCGAGTGGAAGGGCCATCGCTCAACGGATAAAAGTTACTTTAGGGATA 23298740
>seq2
Length=49040938
Score = 98.7 bits (108), Expect = 2e-18
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 243 ACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAAC 302
|||| | ||| |||||||||||||||||| |||| ||||||| ||||| || |||||
Sbjct 11128369 ACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGTCGAGTGGAAG 11128310
Query 303 GGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| |||||||| ||||||||||| ||| || |||||
Sbjct 11128309 GGTCGTCGCTCAACGGATAAAAGTTACTCTAAGGATA 11128273
>seq6
Length=31977256
Score = 95.1 bits (104), Expect = 2e-17
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189
||||| ||||||| ||||||| || |||||||||||| ||||| | ||||||
Sbjct 14859311 AGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCAGA 14859370
Query 190 TTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTC 248
|| || | || | | |||||||||| | ||||| | |||||||| | |||| |
Sbjct 14859371 CCAGACAGAGATTG-GCCCTCGAGTGCAAAGGGAGAAGGGAGCTTGACTGCAAGACCCAC 14859429
Query 249 AAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304
||| ||||| ||||||||||| |||| ||||||| |||| || ||||| ||
Sbjct 14859430 TCGTCGAGCAGAAACGAAAGTCGGCCTTAGTGATCCGATGGTGTCGAGTGGAAGGG 14859485
>seq11
Length=50367376
Score = 77.0 bits (84), Expect = 6e-12
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
|||||| || ||| | ||| | ||| |||||||||||| | || |||||||| || |
Sbjct 6848991 TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCC 6849050
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 6849051 CGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 6849097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982393044608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |