Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq8 168 1e-39 seq7 120 6e-25 seq10 111 3e-22 seq3 109 1e-21 seq2 98.7 2e-18 seq6 95.1 2e-17 seq11 77.0 6e-12 >seq8 Length=59662532 Score = 168 bits (186), Expect = 1e-39 Identities = 177/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| ||||||| || ||||||||||| Sbjct 24480915 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGC 24480974 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || ||| | || | | |||||||||||| ||||| Sbjct 24480975 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 24481033 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 24481034 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 24481093 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || |||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 24481094 TGCCGAGTGGAGGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 24481143 >seq7 Length=51758522 Score = 120 bits (132), Expect = 6e-25 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 148 GCCTCC-CAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC 206 |||||| ||||| |||||||||||| ||||| | |||| | || ||| | || Sbjct 7683282 GCCTCCTCAAAG-GTAACGGAGGCGTGCAAAGGTTTCCTCGAGTCAGACGGAGA-TTGGC 7683339 Query 207 GCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265 | | ||||||||| || ||||| |||||||||| | | || | ||| ||||||||| | Sbjct 7683340 CCTCGAGTGCAAAGACAGAAGGGAGTTTGACTGCAAGATCCACCTGTCGAGCAGGGACAA 7683399 Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 |||||| |||| ||||||| || ||| || ||||| | ||||||| ||| ||||||| Sbjct 7683400 AAGTCGACCTTAGTGATCCGACGATGCCGAGTGGAAGGATCGTCGCTGAACGAATAAAAG 7683459 Query 326 CTACCCTGGGGATA 339 ||| || |||||| Sbjct 7683460 TTACTCTAGGGATA 7683473 >seq10 Length=43275151 Score = 111 bits (122), Expect = 3e-22 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| |||| | |||||||| | |||| | ||| ||||||||| ||| || Sbjct 5713472 AGTGCAAAGGCAGAAGGAAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACAAAAATC 5713413 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||| ||||||| |||||| || ||||| || | || ||| ||||||||||| ||| Sbjct 5713412 GACCTTAGTGATCCGACGGTGCCGAGTGGAAGGGTCTTCACTCAACGGATAAAAGTTACT 5713353 Query 331 CTGGGGATA 339 || ||||| Sbjct 5713352 CTAAGGATA 5713344 >seq3 Length=52284309 Score = 109 bits (120), Expect = 1e-21 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 || ||||| |||| | |||||| ||||||| ||||||| || |||||| |||| Sbjct 23298512 GGAACAGTCTCAGGAAGACAGTTTCTATGGGGCGTATGCCTCCCCAAAGGTAACGAAGGC 23298571 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATG-CGCAC-AGTGCAAAGGCAAAAGGG 228 ||||| | |||| | || | | | || | | | ||||||||| || ||||| Sbjct 23298572 ATGCAAAGGTTTCCTCGGGCCAGACGAAGAT--TGACCCTCGAGTGCAAAGACAGAAGGG 23298629 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 | |||||| | | |||| | ||| || ||||||||||||| | ||| | ||| | || Sbjct 23298630 AGCTTGACTACAAGACCCACCCGTCGAGTAGGGACGAAAGTCAGCTTTAGTCATCTGACG 23298689 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| |||| |||||| ||||||||||| ||| | |||||| Sbjct 23298690 GTGTCGAGTGGAAGGGCCATCGCTCAACGGATAAAAGTTACTTTAGGGATA 23298740 >seq2 Length=49040938 Score = 98.7 bits (108), Expect = 2e-18 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 243 ACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAAC 302 |||| | ||| |||||||||||||||||| |||| ||||||| ||||| || ||||| Sbjct 11128369 ACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGTCGAGTGGAAG 11128310 Query 303 GGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || |||||||| ||||||||||| ||| || ||||| Sbjct 11128309 GGTCGTCGCTCAACGGATAAAAGTTACTCTAAGGATA 11128273 >seq6 Length=31977256 Score = 95.1 bits (104), Expect = 2e-17 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189 ||||| ||||||| ||||||| || |||||||||||| ||||| | |||||| Sbjct 14859311 AGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCAGA 14859370 Query 190 TTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTC 248 || || | || | | |||||||||| | ||||| | |||||||| | |||| | Sbjct 14859371 CCAGACAGAGATTG-GCCCTCGAGTGCAAAGGGAGAAGGGAGCTTGACTGCAAGACCCAC 14859429 Query 249 AAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 ||| ||||| ||||||||||| |||| ||||||| |||| || ||||| || Sbjct 14859430 TCGTCGAGCAGAAACGAAAGTCGGCCTTAGTGATCCGATGGTGTCGAGTGGAAGGG 14859485 >seq11 Length=50367376 Score = 77.0 bits (84), Expect = 6e-12 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 |||||| || ||| | ||| | ||| |||||||||||| | || |||||||| || | Sbjct 6848991 TGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCC 6849050 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||| |||||| |||||| |||| ||| | ||||||| Sbjct 6849051 CGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 6849097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982393044608