Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq2 80.6 3e-13 seq10 75.2 1e-11 >seq2 Length=49040938 Score = 80.6 bits (88), Expect = 3e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||| |||||||| ||||| |||||||||||| ||||| Sbjct 33415915 TTCGTGCAGGTCGGAACTTATCCGACAAGAAATTTTGCTACCTTAGGATCGTTA 33415968 >seq10 Length=43275151 Score = 75.2 bits (82), Expect = 1e-11 Identities = 105/149 (70%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85 ||| |||| |||| | | |||||| |||||||||| || | | ||| ||| | | Sbjct 41824377 GGTATTTTTGTCCAAGTGGAAGTAATCCGCATCTTCACAGACATGTCTATTCCACCGTG- 41824435 Query 86 TCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | || ||||||| || || ||||| | ||||||||||||||||| Sbjct 41824436 TCTCTCTTCGAGACAGTACCCAGATCGTTATGCCTTTCGTACGGGTCGGAACTTACCCGA 41824495 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||| ||||| |||| |||| |||||||| Sbjct 41824496 CAAGAAATTTTGCTATCTTAAGACCGTTA 41824524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547196246892