Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq6 196 1e-47 seq8 147 5e-33 seq10 138 2e-30 seq2 102 2e-19 seq11 77.0 7e-12 seq7 73.4 8e-11 >seq6 Length=31977256 Score = 196 bits (216), Expect = 1e-47 Identities = 147/170 (86%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || ||| |||||||||||||| Sbjct 16514262 CACGCGGCATTG-CTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTGCCTC 16514320 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||| ||||||||| ||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 16514321 CCGT-GGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 16514379 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| || ||| ||||||||||||||||||| ||| Sbjct 16514380 ACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAATCAGAC 16514429 >seq8 Length=59662532 Score = 147 bits (162), Expect = 5e-33 Identities = 111/131 (85%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || |||| ||| ||||| | ||||||||||||||| | |||| ||||| ||||||||||| Sbjct 2881173 AAAATTCTCCATTGCTGTCACCCGTAGGAGTCTGGCCTGTGTTTCAGTCCCAGTGTGACT 2881232 Query 128 GATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187 |||||||||| | |||||| || |||| |||||||||| || ||| |||||||||||| Sbjct 2881233 GATCATCCTCACGGACCAGCTATTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTA 2881292 Query 188 GCTAATCCGAC 198 ||||||| ||| Sbjct 2881293 GCTAATCAGAC 2881303 >seq10 Length=43275151 Score = 138 bits (152), Expect = 2e-30 Identities = 105/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127 || |||| |||||| ||||| || ||||||||||| |||||||||||| |||||||| || Sbjct 39025752 AAAATTCTCCACTGTTGCCTTCCCTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 39025811 Query 128 GATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187 |||||||||||| |||| | || |||| | | |||||| ||| ||| |||||||||||| Sbjct 39025812 GATCATCCTCTCGGACCTGCTATTGATCATTGTCTTGGTAAGCTATTGCCTCACCAACTA 39025871 Query 188 GCTA 191 |||| Sbjct 39025872 GCTA 39025875 Score = 86.0 bits (94), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 29982655 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 29982712 Query 59 CCATTGTCCAATATTCCCCACTGCT 83 ||||||||||| ||||||||||||| Sbjct 29982713 CCATTGTCCAAGATTCCCCACTGCT 29982737 >seq2 Length=49040938 Score = 102 bits (112), Expect = 2e-19 Identities = 76/89 (85%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 110 CTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169 || ||| |||| ||| ||||||||||||| |||||| ||| |||| |||||||||| || Sbjct 2980063 CTTAGTCCCAGCGTGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAG 2980122 Query 170 CCATTACCTCACCAACTAGCTAATCCGAC 198 | ||| ||||||||||||||||||| ||| Sbjct 2980123 CTATTGCCTCACCAACTAGCTAATCAGAC 2980151 >seq11 Length=50367376 Score = 77.0 bits (84), Expect = 7e-12 Identities = 73/91 (80%), Gaps = 7/91 (8%) Strand=Plus/Minus Query 108 GTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTG 167 |||||||| |||||||| |||||||||||||| ||| | | || |||| | || | Sbjct 1171745 GTCTCAGT-CCAGTGTGGCTGATCATCCTCTCGGACAACT-ACTGATCAT-----TGATA 1171693 Query 168 AGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| ||| ||||||||||||||||||| ||| Sbjct 1171692 AGCTATTTCCTCACCAACTAGCTAATCAGAC 1171662 >seq7 Length=51758522 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTC 139 ||||||||||| | |||||||||||||||||||||||||||| ||||| Sbjct 11423090 TAGGAGTCTGGGCTGTGTCTCAGTTCCAGTGTGACTGATCATTCTCTC 11423137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071992410240