Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq6 196 1e-47
seq8 147 5e-33
seq10 138 2e-30
seq2 102 2e-19
seq11 77.0 7e-12
seq7 73.4 8e-11
>seq6
Length=31977256
Score = 196 bits (216), Expect = 1e-47
Identities = 147/170 (86%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||| ||||||||||||||
Sbjct 16514262 CACGCGGCATTG-CTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTGCCTC 16514320
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||| ||||||||| ||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 16514321 CCGT-GGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 16514379
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| || ||| ||||||||||||||||||| |||
Sbjct 16514380 ACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAATCAGAC 16514429
>seq8
Length=59662532
Score = 147 bits (162), Expect = 5e-33
Identities = 111/131 (85%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127
|| |||| ||| ||||| | ||||||||||||||| | |||| ||||| |||||||||||
Sbjct 2881173 AAAATTCTCCATTGCTGTCACCCGTAGGAGTCTGGCCTGTGTTTCAGTCCCAGTGTGACT 2881232
Query 128 GATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187
|||||||||| | |||||| || |||| |||||||||| || ||| ||||||||||||
Sbjct 2881233 GATCATCCTCACGGACCAGCTATTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTA 2881292
Query 188 GCTAATCCGAC 198
||||||| |||
Sbjct 2881293 GCTAATCAGAC 2881303
>seq10
Length=43275151
Score = 138 bits (152), Expect = 2e-30
Identities = 105/124 (85%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACT 127
|| |||| |||||| ||||| || ||||||||||| |||||||||||| |||||||| ||
Sbjct 39025752 AAAATTCTCCACTGTTGCCTTCCCTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 39025811
Query 128 GATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTA 187
|||||||||||| |||| | || |||| | | |||||| ||| ||| ||||||||||||
Sbjct 39025812 GATCATCCTCTCGGACCTGCTATTGATCATTGTCTTGGTAAGCTATTGCCTCACCAACTA 39025871
Query 188 GCTA 191
||||
Sbjct 39025872 GCTA 39025875
Score = 86.0 bits (94), Expect = 1e-14
Identities = 72/85 (85%), Gaps = 4/85 (5%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58
|||||||| | | | | ||||||| ||| |||||| |||| ||||||| |||||||||
Sbjct 29982655 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 29982712
Query 59 CCATTGTCCAATATTCCCCACTGCT 83
||||||||||| |||||||||||||
Sbjct 29982713 CCATTGTCCAAGATTCCCCACTGCT 29982737
>seq2
Length=49040938
Score = 102 bits (112), Expect = 2e-19
Identities = 76/89 (85%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 110 CTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169
|| ||| |||| ||| ||||||||||||| |||||| ||| |||| |||||||||| ||
Sbjct 2980063 CTTAGTCCCAGCGTGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAG 2980122
Query 170 CCATTACCTCACCAACTAGCTAATCCGAC 198
| ||| ||||||||||||||||||| |||
Sbjct 2980123 CTATTGCCTCACCAACTAGCTAATCAGAC 2980151
>seq11
Length=50367376
Score = 77.0 bits (84), Expect = 7e-12
Identities = 73/91 (80%), Gaps = 7/91 (8%)
Strand=Plus/Minus
Query 108 GTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTG 167
|||||||| |||||||| |||||||||||||| ||| | | || |||| | || |
Sbjct 1171745 GTCTCAGT-CCAGTGTGGCTGATCATCCTCTCGGACAACT-ACTGATCAT-----TGATA 1171693
Query 168 AGCCATTACCTCACCAACTAGCTAATCCGAC 198
||| ||| ||||||||||||||||||| |||
Sbjct 1171692 AGCTATTTCCTCACCAACTAGCTAATCAGAC 1171662
>seq7
Length=51758522
Score = 73.4 bits (80), Expect = 8e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTC 139
||||||||||| | |||||||||||||||||||||||||||| |||||
Sbjct 11423090 TAGGAGTCTGGGCTGTGTCTCAGTTCCAGTGTGACTGATCATTCTCTC 11423137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071992410240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |