Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2 208 2e-51 seq3 188 2e-45 seq10 122 2e-25 seq461 75.2 3e-11 >seq2 Length=49040938 Score = 208 bits (230), Expect = 2e-51 Identities = 306/415 (74%), Gaps = 15/415 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||| ||||| |||||| ||||| | Sbjct 36375440 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGATTCGGACCTCCACTTAGTT-TC 36375384 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 36375383 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 36375328 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 36375327 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 36375270 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAG 245 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 36375269 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGGGGCTGAG 36375211 Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 |||||||| |||| || |||||||||| | ||||||||||||||| | |||| Sbjct 36375210 CCTCCTCCCACT-CTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGG 36375153 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct 36375152 TTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCC 36375093 Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 36375092 TTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 36375038 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||| ||||||||| ||| |||||||||| Sbjct 5536199 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 5536140 Query 365 CTTGGA 370 |||||| Sbjct 5536139 CTTGGA 5536134 >seq3 Length=52284309 Score = 188 bits (208), Expect = 2e-45 Identities = 253/338 (75%), Gaps = 12/338 (4%) Strand=Plus/Minus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 ||||||| |||||| ||||| | || ||| ||| || |||| ||| ||||||||| || Sbjct 37157656 GGTTCGGACCTCCACTTAGTT-TCACTCAAGCTT-CATCCTGGTCAT-GGATAGATCACC 37157600 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164 | | || |||||| || | || ||| | |||||| |||||||||||| ||||||| Sbjct 37157599 CAGGTT-CGGGTCCATAAGC-AGTGACAATT-GCCCTATGAAGACTCGCTTT-CGCTACG 37157544 Query 165 CCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | ||| |||| | ||||||| || |||||| | | |||| | ||| Sbjct 37157543 GCTCCTGTGGTTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAAC 37157485 Query 223 AGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGA 281 ||| |||| |||| | || ||||||||||||| || |||||||||| | Sbjct 37157484 AGGCACGCGGTCAGAGGGGCTGAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGT 37157425 Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 ||||||||||||||| | ||| |||||||| || |||||||||||||||| ||||||| Sbjct 37157424 TCTATTTCACTCCCCGATGAGGG-TTCTTTTCACCCTTCCCTCACGGTACTACTTCACTA 37157366 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||||| ||| |||||||||||||| | | |||||| Sbjct 37157365 TCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 37157328 Score = 125 bits (138), Expect = 2e-26 Identities = 106/130 (82%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 |||||||| |||| || |||||||||| | |||||||||||||| |||||||| Sbjct 33672395 CTCCCACTACTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCGAT---GGGGTTCT 33672339 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 |||| || |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct 33672338 TTTCACCCTTCCCTCACGGTACTACTTCACTATCAGTCACCTAGGAGTATTTAGCCTTGC 33672279 Query 370 AGGATGGTCC 379 | | |||||| Sbjct 33672278 AAGGTGGTCC 33672269 >seq10 Length=43275151 Score = 122 bits (134), Expect = 2e-25 Identities = 160/214 (75%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA-TTCGGTTAAGCTTTGCCACTGA 195 |||||| |||||||||||| ||||||| |||| | || |||| | ||||||| Sbjct 22302049 GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCTTAACCAA-GCCACTGC 22301992 Query 196 AAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCC 254 || |||||| | | |||| | ||| ||| |||| |||| | || ||||| Sbjct 22301991 CTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGGGGCTGAGCCTCCTCCC 22301932 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 |||||||| || |||||||||| | ||||||||| ||||| | |||| ||||||| Sbjct 22301931 ACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCA-TCCCCGAT--GGGGGTCTTTTCA 22301875 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCA 348 || |||||||||||||||| |||||||||||||| Sbjct 22301874 CCCTTCCCTCACGGTACTACTTCACTATCGGTCA 22301841 >seq461 Length=1648 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||| ||||||||| ||| |||||||||| Sbjct 1314 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 1373 Query 365 CTTGGA 370 |||||| Sbjct 1374 CTTGGA 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241591209472