Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq2 208 2e-51
seq3 188 2e-45
seq10 122 2e-25
seq461 75.2 3e-11
>seq2
Length=49040938
Score = 208 bits (230), Expect = 2e-51
Identities = 306/415 (74%), Gaps = 15/415 (4%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||| ||||| |||||| ||||| |
Sbjct 36375440 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGATTCGGACCTCCACTTAGTT-TC 36375384
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 36375383 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 36375328
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||||| |||||||||||| ||||||| |||| | ||| |||| |
Sbjct 36375327 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 36375270
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAG 245
||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 36375269 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGGGGCTGAG 36375211
Query 246 TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305
|||||||| |||| || |||||||||| | ||||||||||||||| | ||||
Sbjct 36375210 CCTCCTCCCACT-CTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGG 36375153
Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365
|||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct 36375152 TTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCC 36375093
Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
||| | | |||||| | ||||| || || | ||||| || | |||||||
Sbjct 36375092 TTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 36375038
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||
Sbjct 5536199 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 5536140
Query 365 CTTGGA 370
||||||
Sbjct 5536139 CTTGGA 5536134
>seq3
Length=52284309
Score = 188 bits (208), Expect = 2e-45
Identities = 253/338 (75%), Gaps = 12/338 (4%)
Strand=Plus/Minus
Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104
||||||| |||||| ||||| | || ||| ||| || |||| ||| ||||||||| ||
Sbjct 37157656 GGTTCGGACCTCCACTTAGTT-TCACTCAAGCTT-CATCCTGGTCAT-GGATAGATCACC 37157600
Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164
| | || |||||| || | || ||| | |||||| |||||||||||| |||||||
Sbjct 37157599 CAGGTT-CGGGTCCATAAGC-AGTGACAATT-GCCCTATGAAGACTCGCTTT-CGCTACG 37157544
Query 165 CCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222
|||| | ||| |||| | ||||||| || |||||| | | |||| | |||
Sbjct 37157543 GCTCCTGTGGTTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAAC 37157485
Query 223 AGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGA 281
||| |||| |||| | || ||||||||||||| || |||||||||| |
Sbjct 37157484 AGGCACGCGGTCAGAGGGGCTGAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGT 37157425
Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341
||||||||||||||| | ||| |||||||| || |||||||||||||||| |||||||
Sbjct 37157424 TCTATTTCACTCCCCGATGAGGG-TTCTTTTCACCCTTCCCTCACGGTACTACTTCACTA 37157366
Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379
||||||| ||| |||||||||||||| | | ||||||
Sbjct 37157365 TCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCC 37157328
Score = 125 bits (138), Expect = 2e-26
Identities = 106/130 (82%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
|||||||| |||| || |||||||||| | |||||||||||||| ||||||||
Sbjct 33672395 CTCCCACTACTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCGAT---GGGGTTCT 33672339
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| || |||||||||||||||| ||||||||| |||| || ||||||||||||||
Sbjct 33672338 TTTCACCCTTCCCTCACGGTACTACTTCACTATCAGTCACCTAGGAGTATTTAGCCTTGC 33672279
Query 370 AGGATGGTCC 379
| | ||||||
Sbjct 33672278 AAGGTGGTCC 33672269
>seq10
Length=43275151
Score = 122 bits (134), Expect = 2e-25
Identities = 160/214 (75%), Gaps = 7/214 (3%)
Strand=Plus/Minus
Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA-TTCGGTTAAGCTTTGCCACTGA 195
|||||| |||||||||||| ||||||| |||| | || |||| | |||||||
Sbjct 22302049 GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCTTAACCAA-GCCACTGC 22301992
Query 196 AAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCC 254
|| |||||| | | |||| | ||| ||| |||| |||| | || |||||
Sbjct 22301991 CTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGGGGCTGAGCCTCCTCCC 22301932
Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314
|||||||| || |||||||||| | ||||||||| ||||| | |||| |||||||
Sbjct 22301931 ACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCA-TCCCCGAT--GGGGGTCTTTTCA 22301875
Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCA 348
|| |||||||||||||||| ||||||||||||||
Sbjct 22301874 CCCTTCCCTCACGGTACTACTTCACTATCGGTCA 22301841
>seq461
Length=1648
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||
Sbjct 1314 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 1373
Query 365 CTTGGA 370
||||||
Sbjct 1374 CTTGGA 1379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241591209472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |