Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq6 185 2e-44
seq10 178 3e-42
seq7 149 1e-33
seq1 114 3e-23
seq3 102 2e-19
>seq6
Length=31977256
Score = 185 bits (204), Expect = 2e-44
Identities = 159/194 (82%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||||||||||| ||| |||| |||||| | ||| ||||||| | | || || ||
Sbjct 26717135 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 26717192
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
|||||||||||||||||||||||||| |||||||||| | || ||||||||||||||||
Sbjct 26717193 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTC 26717252
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
||| | | || |||||| ||||||| || ||||||||||||||| ||||| |||
Sbjct 26717253 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTAGTGATCCGGG 26717312
Query 387 CTGTTTCCCTCTCG 400
||||||||||||||
Sbjct 26717313 CTGTTTCCCTCTCG 26717326
>seq10
Length=43275151
Score = 178 bits (196), Expect = 3e-42
Identities = 177/226 (78%), Gaps = 9/226 (4%)
Strand=Plus/Minus
Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234
||||||||||||| | || ||| | ||||||||||||| ||| |||| ||||
Sbjct 17227853 ACGCTCCCCTACCAATTCAATTTGACA---TCCCACAGCTTCGGCTGATCGCTTA-GCCC 17227798
Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294
|| | ||| ||||||| | |||| || |||||||||||||||||||||||||||| |
Sbjct 17227797 CGTT-CATCTTCGGCGCAAGAGCACTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGT 17227739
Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354
||||||||| | || |||||||||||||||| || | | || || ||| |||||||
Sbjct 17227738 GGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTACACCCCTACCTCATTTATCACTGAGC 17227679
Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| |||||||||||||||| ||||| || |||||||||||||
Sbjct 17227678 GGTCATTTAGGGGCCTTAGCTGGTGATCCGGATTGTTTCCCTCTCG 17227633
Score = 161 bits (178), Expect = 2e-37
Identities = 290/411 (71%), Gaps = 22/411 (5%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
|||||| |||| ||||| | |||||| || ||||||||| | ||| ||| | |
Sbjct 5298363 CGACTATGCCTTTCGGCTTGATCTTAGGCCCTGACTCACCCTCTGTGGACGAACCTTGCG 5298304
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118
||||||||||| | ||| | |||||| |||| ||| | |||||| |||
Sbjct 5298303 GAGGAACCCTTGGGTTTTCGAGACATTGGATTCTCACCAACGTTTG-CATTACTCAAGCC 5298245
Query 119 TGCATTCTCACT--CGCATCAACTCCACCAC-ACAGTCACCCGGCAGCTTCACCACTGA- 174
||||||| || ||| || |||| ||| ||| || ||| || | || || |
Sbjct 5298244 GACATTCTCGCTTCCGCTTCG--TCCAACACTACA--CATGCGGGTCCTCC-CCTCTAAG 5298190
Query 175 -CACGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTA 229
|| || |||||||||| | || ||| | ||||||||||||| ||| |||
Sbjct 5298189 GCAGAACACTCCCCTACCTATTCAATTTGACA---TCCCACAGCTTCGGCAGATCGGTTA 5298133
Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289
|||||| | ||| || ||| | | || || || ||||||||||| |||||||| |
Sbjct 5298132 -GCCCCGTT-CATCTTCAGCGTAAGAGCGCTCGATCATTGAGCTATTACACACTCTTTTA 5298075
Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349
||| |||||||||| | | || ||||||||||||| ||| | | || |||||| |||
Sbjct 5298074 AGGGTGGCTGCTTCTAGGAAAATCTCCTGGTTGTCTTTGCACCCCTACCTCCTTTATCAC 5298015
Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
||| | || |||||||||||||||| ||||| ||| |||||||||||||
Sbjct 5298014 TGACTTGTCATTTAGGGGCCTTAGCTGGTGATCCGGGTTGTTTCCCTCTCG 5297964
Score = 73.4 bits (80), Expect = 9e-11
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318
|| || |||| ||||||||||||||||||||| | || ||||||| | || ||||||||
Sbjct 42148242 CTCGATCAGTAAGCTATTACGCACTCTTTCAAAGGTGACTGCTTCTAGGCAAACCTCCT- 42148184
Query 319 GTTGTCT 325
|||||||
Sbjct 42148183 GTTGTCT 42148177
>seq7
Length=51758522
Score = 149 bits (164), Expect = 1e-33
Identities = 150/194 (77%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||||||||| | ||| ||||| ||| | ||| |||||| | || || ||
Sbjct 39730763 CCACAGCTTCGACAGATCGCTTAATCCCG--TTCATCTTCGGCGTAAGAGTGCTCGATCA 39730706
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
|||||||||||||||||||||||||| || || |||| | || ||||||||||||||||
Sbjct 39730705 GTGAGCTATTACGCACTCTTTCAAGGGTGACTACTTCTAGGCAAACCTCCTGGTTGTCTC 39730646
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
||| | || |||||| ||||||| || |||||||||||| ||| ||||| |||
Sbjct 39730645 TGCACCCTTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAACTGGTGATCCGGG 39730586
Query 387 CTGTTTCCCTCTCG 400
|||||||||| |||
Sbjct 39730585 CTGTTTCCCTTTCG 39730572
>seq1
Length=52205531
Score = 114 bits (126), Expect = 3e-23
Identities = 111/139 (80%), Gaps = 8/139 (6%)
Strand=Plus/Minus
Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAA-CCTCCTGGTTGT 323
|||||||||||||||||||||||||||| ||||| | || || ||| |||| | |||||
Sbjct 4626126 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTAC--CCTAGACAAACCTCTTAGTTGT 4626069
Query 324 CTACGCAAC--TCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381
|| ||| | ||| |||||| |||| ||| || |||||| ||||||||| ||||
Sbjct 4626068 CTCTGCACCGTTCC---TCCTTTATCACTTAGTGGTCATTTAGGGACCTTAGCTGGTGAT 4626012
Query 382 CTGGGCTGTTTCCCTCTCG 400
| || ||||||||||||||
Sbjct 4626011 CCGGACTGTTTCCCTCTCG 4625993
Score = 109 bits (120), Expect = 1e-21
Identities = 110/142 (77%), Gaps = 6/142 (4%)
Strand=Plus/Minus
Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318
|| || || |||||||||||||||| |||| |||||||||| | || ||||||||
Sbjct 4610062 CTCGATCACTGAGCTATTACGCACT-----AAGGGTGGCTGCTTCTAGGCAAACCTCCTA 4610008
Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378
||||||| ||| | | || |||||| ||||||| || |||||| | |||||| |
Sbjct 4610007 GTTGTCTCTGCACC-CTACCTCCTTTATCACTGAGCGGTCATTTAGGGACGTTAGCTAGT 4609949
Query 379 GATCTGGGCTGTTTCCCTCTCG 400
|||| | |||||||||||||||
Sbjct 4609948 GATCCGAGCTGTTTCCCTCTCG 4609927
>seq3
Length=52284309
Score = 102 bits (112), Expect = 2e-19
Identities = 93/115 (81%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||| ||||||| ||| |||| |||||| | ||| ||||||| | | || || ||
Sbjct 4629348 CCACAACTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 4629405
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321
||||| |||||||||||||||||||| |||||||||| | || ||||| ||||||
Sbjct 4629406 GTGAGTTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTTCTGGTT 4629460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177591662592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |