Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq6 185 2e-44 seq10 178 3e-42 seq7 149 1e-33 seq1 114 3e-23 seq3 102 2e-19 >seq6 Length=31977256 Score = 185 bits (204), Expect = 2e-44 Identities = 159/194 (82%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 26717135 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 26717192 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| | || |||||||||||||||| Sbjct 26717193 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTC 26717252 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || |||||| ||||||| || ||||||||||||||| ||||| ||| Sbjct 26717253 TGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTAGTGATCCGGG 26717312 Query 387 CTGTTTCCCTCTCG 400 |||||||||||||| Sbjct 26717313 CTGTTTCCCTCTCG 26717326 >seq10 Length=43275151 Score = 178 bits (196), Expect = 3e-42 Identities = 177/226 (78%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||||||||| | || ||| | ||||||||||||| ||| |||| |||| Sbjct 17227853 ACGCTCCCCTACCAATTCAATTTGACA---TCCCACAGCTTCGGCTGATCGCTTA-GCCC 17227798 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || | ||| ||||||| | |||| || |||||||||||||||||||||||||||| | Sbjct 17227797 CGTT-CATCTTCGGCGCAAGAGCACTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGT 17227739 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| | || |||||||||||||||| || | | || || ||| ||||||| Sbjct 17227738 GGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTACACCCCTACCTCATTTATCACTGAGC 17227679 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||||||||||||||| ||||| || ||||||||||||| Sbjct 17227678 GGTCATTTAGGGGCCTTAGCTGGTGATCCGGATTGTTTCCCTCTCG 17227633 Score = 161 bits (178), Expect = 2e-37 Identities = 290/411 (71%), Gaps = 22/411 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||| |||| ||||| | |||||| || ||||||||| | ||| ||| | | Sbjct 5298363 CGACTATGCCTTTCGGCTTGATCTTAGGCCCTGACTCACCCTCTGTGGACGAACCTTGCG 5298304 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 ||||||||||| | ||| | |||||| |||| ||| | |||||| ||| Sbjct 5298303 GAGGAACCCTTGGGTTTTCGAGACATTGGATTCTCACCAACGTTTG-CATTACTCAAGCC 5298245 Query 119 TGCATTCTCACT--CGCATCAACTCCACCAC-ACAGTCACCCGGCAGCTTCACCACTGA- 174 ||||||| || ||| || |||| ||| ||| || ||| || | || || | Sbjct 5298244 GACATTCTCGCTTCCGCTTCG--TCCAACACTACA--CATGCGGGTCCTCC-CCTCTAAG 5298190 Query 175 -CACGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 || || |||||||||| | || ||| | ||||||||||||| ||| ||| Sbjct 5298189 GCAGAACACTCCCCTACCTATTCAATTTGACA---TCCCACAGCTTCGGCAGATCGGTTA 5298133 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 |||||| | ||| || ||| | | || || || ||||||||||| |||||||| | Sbjct 5298132 -GCCCCGTT-CATCTTCAGCGTAAGAGCGCTCGATCATTGAGCTATTACACACTCTTTTA 5298075 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 ||| |||||||||| | | || ||||||||||||| ||| | | || |||||| ||| Sbjct 5298074 AGGGTGGCTGCTTCTAGGAAAATCTCCTGGTTGTCTTTGCACCCCTACCTCCTTTATCAC 5298015 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| | || |||||||||||||||| ||||| ||| ||||||||||||| Sbjct 5298014 TGACTTGTCATTTAGGGGCCTTAGCTGGTGATCCGGGTTGTTTCCCTCTCG 5297964 Score = 73.4 bits (80), Expect = 9e-11 Identities = 57/67 (85%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || |||| ||||||||||||||||||||| | || ||||||| | || |||||||| Sbjct 42148242 CTCGATCAGTAAGCTATTACGCACTCTTTCAAAGGTGACTGCTTCTAGGCAAACCTCCT- 42148184 Query 319 GTTGTCT 325 ||||||| Sbjct 42148183 GTTGTCT 42148177 >seq7 Length=51758522 Score = 149 bits (164), Expect = 1e-33 Identities = 150/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||| | ||| ||||| ||| | ||| |||||| | || || || Sbjct 39730763 CCACAGCTTCGACAGATCGCTTAATCCCG--TTCATCTTCGGCGTAAGAGTGCTCGATCA 39730706 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| || || |||| | || |||||||||||||||| Sbjct 39730705 GTGAGCTATTACGCACTCTTTCAAGGGTGACTACTTCTAGGCAAACCTCCTGGTTGTCTC 39730646 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | || |||||| ||||||| || |||||||||||| ||| ||||| ||| Sbjct 39730645 TGCACCCTTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAACTGGTGATCCGGG 39730586 Query 387 CTGTTTCCCTCTCG 400 |||||||||| ||| Sbjct 39730585 CTGTTTCCCTTTCG 39730572 >seq1 Length=52205531 Score = 114 bits (126), Expect = 3e-23 Identities = 111/139 (80%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAA-CCTCCTGGTTGT 323 |||||||||||||||||||||||||||| ||||| | || || ||| |||| | ||||| Sbjct 4626126 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTAC--CCTAGACAAACCTCTTAGTTGT 4626069 Query 324 CTACGCAAC--TCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381 || ||| | ||| |||||| |||| ||| || |||||| ||||||||| |||| Sbjct 4626068 CTCTGCACCGTTCC---TCCTTTATCACTTAGTGGTCATTTAGGGACCTTAGCTGGTGAT 4626012 Query 382 CTGGGCTGTTTCCCTCTCG 400 | || |||||||||||||| Sbjct 4626011 CCGGACTGTTTCCCTCTCG 4625993 Score = 109 bits (120), Expect = 1e-21 Identities = 110/142 (77%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || || |||||||||||||||| |||| |||||||||| | || |||||||| Sbjct 4610062 CTCGATCACTGAGCTATTACGCACT-----AAGGGTGGCTGCTTCTAGGCAAACCTCCTA 4610008 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 ||||||| ||| | | || |||||| ||||||| || |||||| | |||||| | Sbjct 4610007 GTTGTCTCTGCACC-CTACCTCCTTTATCACTGAGCGGTCATTTAGGGACGTTAGCTAGT 4609949 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 |||| | ||||||||||||||| Sbjct 4609948 GATCCGAGCTGTTTCCCTCTCG 4609927 >seq3 Length=52284309 Score = 102 bits (112), Expect = 2e-19 Identities = 93/115 (81%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||| ||||||| ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 4629348 CCACAACTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 4629405 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 ||||| |||||||||||||||||||| |||||||||| | || ||||| |||||| Sbjct 4629406 GTGAGTTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTTCTGGTT 4629460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177591662592