Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29]
708 sequences; 521,076,696 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 1e-24
seq11 116 4e-24
seq8 114 1e-23
seq5 113 5e-23
seq1 95.1 1e-17
>seq2
Length=49040938
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 9192088 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCATGCCTACGCTCTGGATACATTAGCAT 9192029
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | | |||| | | | ||||||||| || | | ||| | |||||||
Sbjct 9192028 GGGATAACACCACAGGAT-TCTGATCCTATTTTGTTGGCCTTTGGGATCAAA-GTAATGA 9191971
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | |||||| || ||| |||||||| |||||||||||
Sbjct 9191970 TTAAAAGGGACAGTCGGGGGCATTCGTATTCCATATTCAGAGGTGAAAGTCTTGGATTTA 9191911
Query 190 T 190
|
Sbjct 9191910 T 9191910
Score = 111 bits (122), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 3/187 (2%)
Strand=Plus/Plus
Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63
|||| || |||||||||| ||||||||| | |||||| | |||| ||||| | ||||||
Sbjct 5467632 CCAGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTATGCTCTGGATACAT 5467691
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
|| ||| | |||| | | |||| | | | ||||| ||| || | ||| || |
Sbjct 5467692 TAGCATCGGATAACACCAAAGGAT-TCTGATCCTATTATGTTGGCCTTCGGGATCGGA-G 5467749
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| || | ||| | ||||||| | ||||| || |||| ||||||||||||||
Sbjct 5467750 TAATGATTAACAGGGACAATCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 5467809
Query 184 GATTTAT 190
|||||||
Sbjct 5467810 GATTTAT 5467816
>seq11
Length=50367376
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 21186469 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21186410
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | ||| || |||||||| |
Sbjct 21186409 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21186352
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 21186351 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21186294
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 21201749 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21201690
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | ||| || |||||||| |
Sbjct 21201689 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21201632
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 21201631 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21201574
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 21272935 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21272876
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | ||| || |||||||| |
Sbjct 21272875 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21272818
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 21272817 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21272760
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||||
Sbjct 21279551 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21279492
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | ||| || |||||||| |
Sbjct 21279491 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21279434
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 21279433 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21279376
>seq8
Length=59662532
Score = 114 bits (126), Expect = 1e-23
Identities = 134/177 (76%), Gaps = 3/177 (2%)
Strand=Plus/Plus
Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73
||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| |
Sbjct 16233175 TACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGA 16233234
Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133
||| | | |||| | | | ||||| ||| || | ||| || |||||||| ||
Sbjct 16233235 TAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTAA 16233292
Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 16233293 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 16233349
>seq5
Length=40819286
Score = 113 bits (124), Expect = 5e-23
Identities = 136/181 (75%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| ||||||||||| |||||||| | ||||||| |||| |||| | |||||||| |||
Sbjct 12974026 CTGTTACTTTGAAATAATTAGAGTGCCCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 12974085
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | | |||| | | | ||||| ||| || | | ||| || |||||||
Sbjct 12974086 GGGATAACACCACAGGATTTT-GATCCTATTGTGTTGGCCTTTGGGATCGAA-GTAATGA 12974143
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || || | ||||||||||||||||||||
Sbjct 12974144 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTA 12974203
Query 190 T 190
|
Sbjct 12974204 T 12974204
>seq1
Length=52205531
Score = 95.1 bits (104), Expect = 1e-17
Identities = 130/178 (73%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| |||||||| | ||||||| |||| |||| | |||||||| || ||
Sbjct 12289961 TTACTTTGAAGTAATTAGAGTGCCCAAAGCAAGCCTACGCTCTGCATACATTAGCAAGGG 12289902
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | |||| || ||||| || |
Sbjct 12289901 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCAGGATCGGA-GTAATTATTA 12289844
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||| |||| | ||||| || |||| ||||||| |||||||||||||
Sbjct 12289843 ACAGGGACAGTCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAGTTCTTGGATTTAT 12289786
Score = 75.2 bits (82), Expect = 1e-11
Identities = 55/63 (87%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73
||||||||||||||||||| | |||||||| |||| |||| | |||||||||||||| |
Sbjct 16363438 TACTTTGAAAAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTACCATGGGA 16363379
Query 74 TAA 76
|||
Sbjct 16363378 TAA 16363376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511996488320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |