Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaseolus_20vulgaris_20[refseq_20GCF_5F000499845.1_202013-11-29] 708 sequences; 521,076,696 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-24 seq11 116 4e-24 seq8 114 1e-23 seq5 113 5e-23 seq1 95.1 1e-17 >seq2 Length=49040938 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 9192088 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCATGCCTACGCTCTGGATACATTAGCAT 9192029 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | | ||||||||| || | | ||| | ||||||| Sbjct 9192028 GGGATAACACCACAGGAT-TCTGATCCTATTTTGTTGGCCTTTGGGATCAAA-GTAATGA 9191971 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | |||||| || ||| |||||||| ||||||||||| Sbjct 9191970 TTAAAAGGGACAGTCGGGGGCATTCGTATTCCATATTCAGAGGTGAAAGTCTTGGATTTA 9191911 Query 190 T 190 | Sbjct 9191910 T 9191910 Score = 111 bits (122), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||| ||||||||| | |||||| | |||| ||||| | |||||| Sbjct 5467632 CCAGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTATGCTCTGGATACAT 5467691 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 || ||| | |||| | | |||| | | | ||||| ||| || | ||| || | Sbjct 5467692 TAGCATCGGATAACACCAAAGGAT-TCTGATCCTATTATGTTGGCCTTCGGGATCGGA-G 5467749 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| | ||||||| | ||||| || |||| |||||||||||||| Sbjct 5467750 TAATGATTAACAGGGACAATCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 5467809 Query 184 GATTTAT 190 ||||||| Sbjct 5467810 GATTTAT 5467816 >seq11 Length=50367376 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 21186469 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21186410 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 21186409 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21186352 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 21186351 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21186294 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 21201749 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21201690 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 21201689 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21201632 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 21201631 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21201574 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 21272935 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21272876 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 21272875 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21272818 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 21272817 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21272760 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 21279551 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 21279492 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 21279491 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 21279434 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 21279433 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 21279376 >seq8 Length=59662532 Score = 114 bits (126), Expect = 1e-23 Identities = 134/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73 ||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| | Sbjct 16233175 TACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGA 16233234 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| | | |||| | | | ||||| ||| || | ||| || |||||||| || Sbjct 16233235 TAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTAA 16233292 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 16233293 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 16233349 >seq5 Length=40819286 Score = 113 bits (124), Expect = 5e-23 Identities = 136/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||||||| |||||||| | ||||||| |||| |||| | |||||||| ||| Sbjct 12974026 CTGTTACTTTGAAATAATTAGAGTGCCCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 12974085 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | | ||||| ||| || | | ||| || ||||||| Sbjct 12974086 GGGATAACACCACAGGATTTT-GATCCTATTGTGTTGGCCTTTGGGATCGAA-GTAATGA 12974143 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || || | |||||||||||||||||||| Sbjct 12974144 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTA 12974203 Query 190 T 190 | Sbjct 12974204 T 12974204 >seq1 Length=52205531 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/178 (73%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| |||||||| | ||||||| |||| |||| | |||||||| || || Sbjct 12289961 TTACTTTGAAGTAATTAGAGTGCCCAAAGCAAGCCTACGCTCTGCATACATTAGCAAGGG 12289902 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | |||| || ||||| || | Sbjct 12289901 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCAGGATCGGA-GTAATTATTA 12289844 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||| |||| | ||||| || |||| ||||||| ||||||||||||| Sbjct 12289843 ACAGGGACAGTCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAGTTCTTGGATTTAT 12289786 Score = 75.2 bits (82), Expect = 1e-11 Identities = 55/63 (87%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 15 TACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAA 73 ||||||||||||||||||| | |||||||| |||| |||| | |||||||||||||| | Sbjct 16363438 TACTTTGAAAAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTACCATGGGA 16363379 Query 74 TAA 76 ||| Sbjct 16363378 TAA 16363376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511996488320